Information for 11-AAAACAAACA (Motif 11)

C T G A T C G A C T G A C T G A A G T C C G T A C G T A C T G A A G T C C G T A
Reverse Opposite:
A C G T C T A G A G C T A C G T C G A T C T A G G A C T A G C T A G C T G A C T
p-value:1e-11
log p-value:-2.641e+01
Information Content per bp:1.824
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.13%
Number of Background Sequences with motif265.9
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets52.5 +/- 21.8bp
Average Position of motif in Background50.1 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:AAAACAAACA---
-AAACAAACATTC
 C T G A T C G A C T G A C T G A A G T C C G T A C G T A C T G A A G T C C G T A A C G T A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:AAAACAAACA
-AAATAAACA
 C T G A T C G A C T G A C T G A A G T C C G T A C G T A C T G A A G T C C G T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AAAACAAACA
WAAGTAAAYA
 C T G A T C G A C T G A C T G A A G T C C G T A C G T A C T G A A G T C C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAAACAAACA
AAAGTAAACA
 C T G A T C G A C T G A C T G A A G T C C G T A C G T A C T G A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAAACAAACA
AAAGTAAACA
 C T G A T C G A C T G A C T G A A G T C C G T A C G T A C T G A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----AAAACAAACA--
TGCCAAAATAAACANN
 A C G T A C G T A C G T A C G T C T G A T C G A C T G A C T G A A G T C C G T A C G T A C T G A A G T C C G T A A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AAAACAAACA----
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T C T G A T C G A C T G A C T G A A G T C C G T A C G T A C T G A A G T C C G T A A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

FOXP3/MA0850.1/Jaspar

Match Rank:8
Score:0.71
Offset:3
Orientation:forward strand
Alignment:AAAACAAACA
---GTAAACA
 C T G A T C G A C T G A C T G A A G T C C G T A C G T A C T G A A G T C C G T A
A C G T A C G T A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAAACAAACA--
TAAGTAAACAAA
 C T G A T C G A C T G A C T G A A G T C C G T A C G T A C T G A A G T C C G T A A C G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AAAACAAACA---
CAAAAGTAAACAAAG
 A C G T A C G T C T G A T C G A C T G A C T G A A G T C C G T A C G T A C T G A A G T C C G T A A C G T A C G T A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G