Information for 10-WCCTRTKTGAATW (Motif 19)

C G T A A G T C A G T C A C G T T C G A A C G T A C T G A C G T A C T G C G T A C T G A A C G T C G T A
Reverse Opposite:
C G A T C G T A A G C T A C G T A G T C C G T A G T A C C G T A A G C T C G T A A C T G A C T G C G A T
p-value:1e-9
log p-value:-2.084e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 23.5bp
Average Position of motif in Background33.2 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:WCCTRTKTGAATW
----ATTTGAATT
 C G T A A G T C A G T C A C G T T C G A A C G T A C T G A C G T A C T G C G T A C T G A A C G T C G T A
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

FOXB1/MA0845.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:WCCTRTKTGAATW-
---TATGTAAATAT
 C G T A A G T C A G T C A C G T T C G A A C G T A C T G A C G T A C T G C G T A C T G A A C G T C G T A A C G T
A C G T A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:WCCTRTKTGAATW-----
-NTTNTATGAATGTGNNC
 C G T A A G T C A G T C A C G T T C G A A C G T A C T G A C G T A C T G C G T A C T G A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:WCCTRTKTGAATW----
-NNNTATTGAATTGNNN
 C G T A A G T C A G T C A C G T T C G A A C G T A C T G A C G T A C T G C G T A C T G A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:WCCTRTKTGAATW--
-----TTTGAAACCG
 C G T A A G T C A G T C A C G T T C G A A C G T A C T G A C G T A C T G C G T A C T G A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:WCCTRTKTGAATW
----ATTTGCATA
 C G T A A G T C A G T C A C G T T C G A A C G T A C T G A C G T A C T G C G T A C T G A A C G T C G T A
A C G T A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:WCCTRTKTGAATW-
----ATTTGCATAA
 C G T A A G T C A G T C A C G T T C G A A C G T A C T G A C G T A C T G C G T A C T G A A C G T C G T A A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:WCCTRTKTGAATW-
----ATTTGCATAT
 C G T A A G T C A G T C A C G T T C G A A C G T A C T G A C G T A C T G C G T A C T G A A C G T C G T A A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:WCCTRTKTGAATW---
-----TGTGGATTNNN
 C G T A A G T C A G T C A C G T T C G A A C G T A C T G A C G T A C T G C G T A C T G A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxa2/MA0047.2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:WCCTRTKTGAATW
-NCTAAGTAAACA
 C G T A A G T C A G T C A C G T T C G A A C G T A C T G A C G T A C T G C G T A C T G A A C G T C G T A
A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A