Information for 5-CAAGGCACACATTTTA (Motif 9)

T G A C G T C A C T G A C T A G T C A G T A G C G T C A T A G C G T C A T A G C G T C A A C G T A C G T A G C T G A C T T G C A
Reverse Opposite:
A C G T C T G A T C G A T G C A T G C A C A G T A T C G C A G T A T C G C A G T A T C G A G T C G A T C G A C T C A G T A C T G
p-value:1e-10
log p-value:-2.379e+01
Information Content per bp:1.425
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.6 +/- 29.7bp
Average Position of motif in Background44.3 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CAAGGCACACATTTTA
CGAAGCACACAAAATA
 T G A C G T C A C T G A C T A G T C A G T A G C G T C A T A G C G T C A T A G C G T C A A C G T A C G T A G C T G A C T T G C A
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAAGGCACACATTTTA
AGCGGCACACACGCAA
 T G A C G T C A C T G A C T A G T C A G T A G C G T C A T A G C G T C A T A G C G T C A A C G T A C G T A G C T G A C T T G C A
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAAGGCACACATTTTA
CCAGGAACAG------
 T G A C G T C A C T G A C T A G T C A G T A G C G T C A T A G C G T C A T A G C G T C A A C G T A C G T A G C T G A C T T G C A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CAAGGCACACATTTTA
NNNVCTGWGYAAACASN---
 A C G T A C G T A C G T A C G T T G A C G T C A C T G A C T A G T C A G T A G C G T C A T A G C G T C A T A G C G T C A A C G T A C G T A G C T G A C T T G C A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CAAGGCACACATTTTA
TGCCAAAATAAACANN---
 A C G T A C G T A C G T T G A C G T C A C T G A C T A G T C A G T A G C G T C A T A G C G T C A T A G C G T C A A C G T A C G T A G C T G A C T T G C A
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAAGGCACACATTTTA
-RGGGCACTAACY---
 T G A C G T C A C T G A C T A G T C A G T A G C G T C A T A G C G T C A T A G C G T C A A C G T A C G T A G C T G A C T T G C A
A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CAAGGCACACATTTTA
NNGGCCACGCCTTTN-
 T G A C G T C A C T G A C T A G T C A G T A G C G T C A T A G C G T C A T A G C G T C A A C G T A C G T A G C T G A C T T G C A
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CAAGGCACACATTTTA
----GCAGTGATTT--
 T G A C G T C A C T G A C T A G T C A G T A G C G T C A T A G C G T C A T A G C G T C A A C G T A C G T A G C T G A C T T G C A
A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAAGGCACACATTTTA
TCCAATCCACA-------
 A C G T A C G T T G A C G T C A C T G A C T A G T C A G T A G C G T C A T A G C G T C A T A G C G T C A A C G T A C G T A G C T G A C T T G C A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CAAGGCACACATTTTA
----TCACACCT----
 T G A C G T C A C T G A C T A G T C A G T A G C G T C A T A G C G T C A T A G C G T C A A C G T A C G T A G C T G A C T T G C A
A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T