Information for 8-GGAATTGGCC (Motif 19)

A C T G A C T G C G T A C G T A A C G T A C G T A C T G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A G T C A G T C
p-value:1e-5
log p-value:-1.324e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets74.0 +/- 17.6bp
Average Position of motif in Background45.1 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GGAATTGGCC
----TTGGCA
 A C T G A C T G C G T A C G T A A C G T A C G T A C T G A C T G A G T C A G T C
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGAATTGGCC
CCGATTGGCT
 A C T G A C T G C G T A C G T A A C G T A C G T A C T G A C T G A G T C A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGAATTGGCC--
---NTTGGCANN
 A C T G A C T G C G T A C G T A A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGAATTGGCC
NCTGGAATGC---
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C T G A C T G A G T C A G T C
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

PH0024.1_Dlx5/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGAATTGGCC---
GGGGTAATTAGCTCTG
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A T C G A T C G T C A G T C A G G A C T G T C A C G T A G A C T C A G T C T G A T A C G A G T C A C G T T G A C A C G T A T C G

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGAATTGGCC
ACAGGATGTGGT-
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C T G A C T G A G T C A G T C
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGAATTGGCC
GGAAATTCCC
 A C T G A C T G C G T A C G T A A C G T A C G T A C T G A C T G A G T C A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

MSX2/MA0708.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGAATTGGCC
NTAATTGG--
 A C T G A C T G C G T A C G T A A C G T A C G T A C T G A C T G A G T C A G T C
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTGGCC-
GGGAAATCCCCN
 A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C T G A C T G A G T C A G T C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGAATTGGCC
AGAGGAAGTG---
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C T G A C T G A G T C A G T C
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T