Information for 5-ATTTGAAATTAGG (Motif 10)

C G T A A C G T A C G T A C G T A C T G G T C A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C C G A T C G T A C G T A C G A T A C G T A C G T A G T C C G T A C G T A C G T A A C G T
p-value:1e-9
log p-value:-2.282e+01
Information Content per bp:1.950
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 34.5bp
Average Position of motif in Background53.6 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATTTGAAATTAGG
ATTTGAATT----
 C G T A A C G T A C G T A C G T A C T G G T C A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATTTGAAATTAGG
-TTTGAAACCG--
 C G T A A C G T A C G T A C G T A C T G G T C A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T

PH0061.1_Hoxb6/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATTTGAAATTAGG--
TATTGGTAATTACCTT
 A C G T C G T A A C G T A C G T A C G T A C T G G T C A C G T A C G T A A C G T A C G T C G T A A C T G A C T G A C G T A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGAAATTAGG
CCTTTGATGT----
 A C G T C G T A A C G T A C G T A C G T A C T G G T C A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATTTGAAATTAGG
ATTTGCATAT---
 C G T A A C G T A C G T A C G T A C T G G T C A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATTTGAAATTAGG
TTCATTTGCATAT---
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G G T C A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T

VSX1/MA0725.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ATTTGAAATTAGG
----NTAATTAG-
 C G T A A C G T A C G T A C G T A C T G G T C A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
A C G T A C G T A C G T A C G T T G C A G A C T G T C A C T G A A G C T C A G T C T G A C T A G A C G T

VSX2/MA0726.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ATTTGAAATTAGG
----NTAATTAG-
 C G T A A C G T A C G T A C G T A C T G G T C A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
A C G T A C G T A C G T A C G T T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G A C G T

EN1/MA0027.2/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATTTGAAATTAGG
----CTAATTAG-
 C G T A A C G T A C G T A C G T A C T G G T C A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A T G C G A C T T G C A G T C A A C G T A G C T C G T A T C A G A C G T

Msx3/MA0709.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATTTGAAATTAGG
----CCAATTAA-
 C G T A A C G T A C G T A C G T A C T G G T C A C G T A C G T A A C G T A C G T C G T A A C T G A C T G
A C G T A C G T A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T