Information for 2-TTSACMACCTTAC (Motif 2)

A C G T A C G T A T C G C G T A A G T C G T A C C G T A A G T C A G T C A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G C G A T G T C A C G T A A C T G A C T G A C G T A C T G C T A G A C G T A T C G C G T A G T C A
p-value:1e-13
log p-value:-3.096e+01
Information Content per bp:1.853
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.3 +/- 18.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0066.1_Hoxc11/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTSACMACCTTAC
NNNTTTTACGACNTTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A G T C G T A C C G T A A G T C A G T C A C G T A C G T C G T A A G T C
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTSACMACCTTAC
NNGTTTTACGACTTTA-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A G T C G T A C C G T A A G T C A G T C A C G T A C G T C G T A A G T C
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TTSACMACCTTAC
GNNNTTTTACGACCTNA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A G T C G T A C C G T A A G T C A G T C A C G T A C G T C G T A A G T C
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TTSACMACCTTAC
ANNATTTTACGACNTNA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A G T C G T A C C G T A A G T C A G T C A C G T A C G T C G T A A G T C
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTSACMACCTTAC
ANNTTTTACGACNTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A G T C G T A C C G T A A G T C A G T C A C G T A C G T C G T A A G T C
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTSACMACCTTAC
NAATTTTATTACCTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A G T C G T A C C G T A A G T C A G T C A C G T A C G T C G T A A G T C
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTSACMACCTTAC
NNNATTTTACGACNNTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A G T C G T A C C G T A A G T C A G T C A C G T A C G T C G T A A G T C
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TTSACMACCTTAC
----NCACCTGTN
 A C G T A C G T A T C G C G T A A G T C G T A C C G T A A G T C A G T C A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTSACMACCTTAC-
CATAAGACCACCATTAC
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A A G T C G T A C C G T A A G T C A G T C A C G T A C G T C G T A A G T C A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TTSACMACCTTAC
---ACCACCTGTT
 A C G T A C G T A T C G C G T A A G T C G T A C C G T A A G T C A G T C A C G T A C G T C G T A A G T C
A C G T A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T