Information for 8-ACTAAAGTCC (Motif 19)

T G C A G T A C G A C T G C T A C T G A G T C A A T C G G C A T T G A C A G T C
Reverse Opposite:
A C T G A C T G C G T A A T G C C A G T G A C T C G A T C T G A C A T G A C G T
p-value:1e-6
log p-value:-1.582e+01
Information Content per bp:1.666
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif176.8
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets48.7 +/- 23.0bp
Average Position of motif in Background49.9 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ACTAAAGTCC-----
GGCAAAAGTCCAATAA
 A C G T T G C A G T A C G A C T G C T A C T G A G T C A A T C G G C A T T G A C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ACTAAAGTCC------
NATTTAAGTACTTANNA
 A C G T T G C A G T A C G A C T G C T A C T G A G T C A A T C G G C A T T G A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PH0116.1_Nkx2-9/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACTAAAGTCC------
NATTTAAGTACTTNAAA
 A C G T T G C A G T A C G A C T G C T A C T G A G T C A A T C G G C A T T G A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ACTAAAGTCC------
CTTTAAGTACTTAATG
 T G C A G T A C G A C T G C T A C T G A G T C A A T C G G C A T T G A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ACTAAAGTCC-
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T T G C A G T A C G A C T G C T A C T G A G T C A A T C G G C A T T G A C A G T C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ACTAAAGTCC-
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T T G C A G T A C G A C T G C T A C T G A G T C A A T C G G C A T T G A C A G T C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACTAAAGTCC------
ACTCCAAGTACTTGGAA
 A C G T T G C A G T A C G A C T G C T A C T G A G T C A A T C G G C A T T G A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

ISL2/MA0914.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ACTAAAGTCC
--TTAAGTGC
 T G C A G T A C G A C T G C T A C T G A G T C A A T C G G C A T T G A C A G T C
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACTAAAGTCC--
--TTAAGTGCTT
 T G C A G T A C G A C T G C T A C T G A G T C A A T C G G C A T T G A C A G T C A C G T A C G T
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACTAAAGTCC
-NTCAAGTGG
 T G C A G T A C G A C T G C T A C T G A G T C A A T C G G C A T T G A C A G T C
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G