p-value: | 1e-12 |
log p-value: | -2.840e+01 |
Information Content per bp: | 1.832 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.95% |
Number of Background Sequences with motif | 2.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 61.2 +/- 16.1bp |
Average Position of motif in Background | 47.8 +/- 26.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 1 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GTCTGTTTCTTGGGSG --CTGTTCCTGG---- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.56 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GTCTGTTTCTTGGGSG VBSYGTCTGG---------- |
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ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTCTGTTTCTTGGGSG TKCTGTTCCA------ |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTCTGTTTCTTGGGSG CTGTCTGG---------- |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTCTGTTTCTTGGGSG TGTCTGDCACCT----- |
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PB0151.1_Myf6_2/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----GTCTGTTTCTTGGGSG GGNGCGNCTGTTNNN------ |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GTCTGTTTCTTGGGSG --CTGTTGCTAGGS-- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------GTCTGTTTCTTGGGSG NNTNNTGTCTGGNNTNG----- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 9 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTCTGTTTCTTGGGSG TWGTCTGV---------- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTCTGTTTCTTGGGSG CTGTCTGTCACCT----- |
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