Information for 9-CGCCTGGCCA (Motif 26)

G A T C C T A G G T A C A T G C G A C T A T C G T A C G G T A C A T G C T G C A
Reverse Opposite:
A C G T T A C G C A T G A T G C T A G C C T G A T A C G C A T G G A T C C T A G
p-value:1e-7
log p-value:-1.673e+01
Information Content per bp:1.526
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.65%
Number of Background Sequences with motif442.9
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets48.6 +/- 25.1bp
Average Position of motif in Background48.5 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0147.1_Max_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CGCCTGGCCA
NNGTCGCGTGNCAC
 A C G T A C G T A C G T A C G T G A T C C T A G G T A C A T G C G A C T A T C G T A C G G T A C A T G C T G C A
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGCCTGGCCA-
--NTTGGCANN
 G A T C C T A G G T A C A T G C G A C T A T C G T A C G G T A C A T G C T G C A A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGCCTGGCCA
--CTAGGCCT
 G A T C C T A G G T A C A T G C G A C T A T C G T A C G G T A C A T G C T G C A
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CGCCTGGCCA
---TTGGCA-
 G A T C C T A G G T A C A T G C G A C T A T C G T A C G G T A C A T G C T G C A
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGGCCA-----
TACGCCCCGCCACTCTG
 A C G T A C G T G A T C C T A G G T A C A T G C G A C T A T C G T A C G G T A C A T G C T G C A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Creb3l2/MA0608.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTGGCCA
ACACGTGGC--
 A C G T G A T C C T A G G T A C A T G C G A C T A T C G T A C G G T A C A T G C T G C A
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGCCTGGCCA
NNCGCGTGNN--
 A C G T A C G T G A T C C T A G G T A C A T G C G A C T A T C G T A C G G T A C A T G C T G C A
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGGCCA
NNCACCTGNN--
 A C G T A C G T G A T C C T A G G T A C A T G C G A C T A T C G T A C G G T A C A T G C T G C A
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGCCTGGCCA
--CTTGGCAA
 G A T C C T A G G T A C A T G C G A C T A T C G T A C G G T A C A T G C T G C A
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGGCCA
TACACCTGTC--
 A C G T A C G T G A T C C T A G G T A C A T G C G A C T A T C G T A C G G T A C A T G C T G C A
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T