Information for 3-AAABAGCCAAAAG (Motif 10)

C G T A C T G A C T G A A C T G T C G A A C T G A T G C A G T C C T G A C G T A G T C A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T A G C T A C T G A T C G A G T C A G C T T A G C A G C T A G C T A C G T
p-value:1e-10
log p-value:-2.435e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.2 +/- 24.2bp
Average Position of motif in Background66.1 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarb/MA0857.1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAABAGCCAAAAG----
-AAAGGTCAAAAGGTCA
 C G T A C T G A C T G A A C T G T C G A A C T G A T G C A G T C C T G A C G T A G T C A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAABAGCCAAAAG
--CGTGCCAAG--
 C G T A C T G A C T G A A C T G T C G A A C T G A T G C A G T C C T G A C G T A G T C A C G T A A C T G
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAABAGCCAAAAG-----
--AAGGTCAAAAGGTCAA
 C G T A C T G A C T G A A C T G T C G A A C T G A T G C A G T C C T G A C G T A G T C A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AAABAGCCAAAAG
----TGCCAA---
 C G T A C T G A C T G A A C T G T C G A A C T G A T G C A G T C C T G A C G T A G T C A C G T A A C T G
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAABAGCCAAAAG----
--AGAGTCCAAAGTCCA
 C G T A C T G A C T G A A C T G T C G A A C T G A T G C A G T C C T G A C G T A G T C A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAABAGCCAAAAG--
ARGAGGMCAAAATGW
 C G T A C T G A C T G A A C T G T C G A A C T G A T G C A G T C C T G A C G T A G T C A C G T A A C T G A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAABAGCCAAAAG---
AAACAGACAAAGGAAT
 C G T A C T G A C T G A A C T G T C G A A C T G A T G C A G T C C T G A C G T A G T C A C G T A A C T G A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AAABAGCCAAAAG----
-CANAGNNCAAAGTCCA
 C G T A C T G A C T G A A C T G T C G A A C T G A T G C A G T C C T G A C G T A G T C A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AAABAGCCAAAAG-
----ANCCGGAAGT
 C G T A C T G A C T G A A C T G T C G A A C T G A T G C A G T C C T G A C G T A G T C A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AAABAGCCAAAAG-
--AGAAACGAAAGT
 C G T A C T G A C T G A A C T G T C G A A C T G A T G C A G T C C T G A C G T A G T C A C G T A A C T G A C G T
A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T