Information for 8-CATGCGAAGA (Motif 20)

G A T C G T C A G C A T A C T G G A T C A T C G G T C A C G T A A T C G G T C A
Reverse Opposite:
A C G T A T G C A C G T A C G T A T G C C T A G A G T C C G T A A C G T C T A G
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.802
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets36.6 +/- 26.6bp
Average Position of motif in Background48.7 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CATGCGAAGA
CSTGGGAAAD
 G A T C G T C A G C A T A C T G G A T C A T C G G T C A C G T A A T C G G T C A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CATGCGAAGA
GGTGCCAAGT
 G A T C G T C A G C A T A C T G G A T C A T C G G T C A C G T A A T C G G T C A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CATGCGAAGA--
TATGCWAATBAV
 G A T C G T C A G C A T A C T G G A T C A T C G G T C A C G T A A T C G G T C A A C G T A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CATGCGAAGA
TTATGCAAAT-
 A C G T G A T C G T C A G C A T A C T G G A T C A T C G G T C A C G T A A T C G G T C A
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CATGCGAAGA----
NTNTATGTGCACATNNN
 A C G T A C G T A C G T G A T C G T C A G C A T A C T G G A T C A T C G G T C A C G T A A T C G G T C A A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CATGCGAAGA----
NNGTATGTGCACATNNN
 A C G T A C G T A C G T G A T C G T C A G C A T A C T G G A T C A T C G G T C A C G T A A T C G G T C A A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CATGCGAAGA
TATGCAAAT-
 G A T C G T C A G C A T A C T G G A T C A T C G G T C A C G T A A T C G G T C A
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CATGCGAAGA
TATGCAAAT-
 G A T C G T C A G C A T A C T G G A T C A T C G G T C A C G T A A T C G G T C A
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CATGCGAAGA
GCGCATGCGCAC-
 A C G T A C G T A C G T G A T C G T C A G C A T A C T G G A T C A T C G G T C A C G T A A T C G G T C A
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CATGCGAAGA-
TATGTAAATAT
 G A T C G T C A G C A T A C T G G A T C A T C G G T C A C G T A A T C G G T C A A C G T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T