Information for 9-ACTACAAGTCCCG (Motif 11)

C G T A T A G C A C G T C G T A A G T C T C G A C G T A A C T G A G C T A G T C A G T C A G T C C T A G
Reverse Opposite:
A G T C A C T G A C T G A C T G C T G A T G A C C G A T A C G T C T A G C G A T C G T A A C T G A C G T
p-value:1e-12
log p-value:-2.899e+01
Information Content per bp:1.802
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif52.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets59.0 +/- 22.0bp
Average Position of motif in Background39.6 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.90
Offset:0
Orientation:forward strand
Alignment:ACTACAAGTCCCG
ACTACAATTCCC-
 C G T A T A G C A C G T C G T A A G T C T C G A C G T A A C T G A G C T A G T C A G T C A G T C C T A G
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-ACTACAAGTCCCG------
RACTACAACTCCCAGVAKGC
 A C G T C G T A T A G C A C G T C G T A A G T C T C G A C G T A A C T G A G C T A G T C A G T C A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-ACTACAAGTCCCG------
AACTACAATTCCCAGAATGC
 A C G T C G T A T A G C A C G T C G T A A G T C T C G A C G T A A C T G A G C T A G T C A G T C A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ACTACAAGTCCCG-----
---ACCACTCTCGGTCAC
 C G T A T A G C A C G T C G T A A G T C T C G A C G T A A C T G A G C T A G T C A G T C A G T C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:ACTACAAGTCCCG--
-----NYTTCCCGCC
 C G T A T A G C A C G T C G T A A G T C T C G A C G T A A C T G A G C T A G T C A G T C A G T C C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:ACTACAAGTCCCG----
-------TTCCCGCCWG
 C G T A T A G C A C G T C G T A A G T C T C G A C G T A A C T G A G C T A G T C A G T C A G T C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:ACTACAAGTCCCG---
----VDTTTCCCGCCA
 C G T A T A G C A C G T C G T A A G T C T C G A C G T A A C T G A G C T A G T C A G T C A G T C C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ACTACAAGTCCCG---
-----NNTTCCCGCCC
 C G T A T A G C A C G T C G T A A G T C T C G A C G T A A C T G A G C T A G T C A G T C A G T C C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:ACTACAAGTCCCG-----
------TTTCCCGCCMAV
 C G T A T A G C A C G T C G T A A G T C T C G A C G T A A C T G A G C T A G T C A G T C A G T C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:ACTACAAGTCCCG--
-----DTTTCCCGCC
 C G T A T A G C A C G T C G T A A G T C T C G A C G T A A C T G A G C T A G T C A G T C A G T C C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C