Information for 3-CCTSGGCGSCGCTGYM (Motif 6)

A T G C A G T C A C G T A T C G A C T G A C T G A G T C A C T G A T G C A T G C A C T G A G T C A C G T A C T G A G C T G T A C
Reverse Opposite:
A C G T C T G A A G T C C G T A A C T G A G T C A T C G A T C G A G T C C T A G A G T C A G T C A T G C C G T A A C T G T A C G
p-value:1e-13
log p-value:-3.085e+01
Information Content per bp:1.884
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 27.2bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCTSGGCGSCGCTGYM
NNNNTTGGCGCCGANNN-
 A C G T A C G T A T G C A G T C A C G T A T C G A C T G A C T G A G T C A C T G A T G C A T G C A C T G A G T C A C G T A C T G A G C T G T A C
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCTSGGCGSCGCTGYM
-MKGGGYGTGGCC---
 A T G C A G T C A C G T A T C G A C T G A C T G A G T C A C T G A T G C A T G C A C T G A G T C A C G T A C T G A G C T G T A C
A C G T G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCTSGGCGSCGCTGYM---
----GGNGCGNCTGTTNNN
 A T G C A G T C A C G T A T C G A C T G A C T G A G T C A C T G A T G C A T G C A C T G A G T C A C G T A C T G A G C T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCTSGGCGSCGCTGYM
NNNNTTGGCGCCGANNN-
 A C G T A C G T A T G C A G T C A C G T A T C G A C T G A C T G A G T C A C T G A T G C A T G C A C T G A G T C A C G T A C T G A G C T G T A C
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCTSGGCGSCGCTGYM
RGKGGGCGGAGC----
 A T G C A G T C A C G T A T C G A C T G A C T G A G T C A C T G A T G C A T G C A C T G A G T C A C G T A C T G A G C T G T A C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCTSGGCGSCGCTGYM
--TGGGTGGGGC----
 A T G C A G T C A C G T A T C G A C T G A C T G A G T C A C T G A T G C A T G C A C T G A G T C A C G T A C T G A G C T G T A C
A C G T A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCTSGGCGSCGCTGYM
NNVDGGGYGGGGCYN--
 A C G T A T G C A G T C A C G T A T C G A C T G A C T G A G T C A C T G A T G C A T G C A C T G A G T C A C G T A C T G A G C T G T A C
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCTSGGCGSCGCTGYM
AGGGGGCGGGGCTG--
 A T G C A G T C A C G T A T C G A C T G A C T G A G T C A C T G A T G C A T G C A C T G A G T C A C G T A C T G A G C T G T A C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCTSGGCGSCGCTGYM
-GGGGGCGGGGCC---
 A T G C A G T C A C G T A T C G A C T G A C T G A G T C A C T G A T G C A T G C A C T G A G T C A C G T A C T G A G C T G T A C
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CCTSGGCGSCGCTGYM
------CGCAGCTGCG
 A T G C A G T C A C G T A T C G A C T G A C T G A G T C A C T G A T G C A T G C A C T G A G T C A C G T A C T G A G C T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G