Information for 12-YCWMGCCCTTTCT (Motif 24)

G A C T A G T C C G A T T G C A A C T G A G T C A G T C A G T C A C G T A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T C G T A A C T G C T A G
p-value:1e-9
log p-value:-2.267e+01
Information Content per bp:1.895
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 22.2bp
Average Position of motif in Background40.4 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:YCWMGCCCTTTCT--
-NNGCACCTTTCTCC
 G A C T A G T C C G A T T G C A A C T G A G T C A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Klf12/MA0742.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--YCWMGCCCTTTCT
GACCACGCCCTTATT
 A C G T A C G T G A C T A G T C C G A T T G C A A C T G A G T C A G T C A G T C A C G T A C G T A C G T A G T C A C G T
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

KLF13/MA0657.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---YCWMGCCCTTTCT--
ATGCCACGCCCCTTTTTG
 A C G T A C G T A C G T G A C T A G T C C G A T T G C A A C T G A G T C A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G

PB0039.1_Klf7_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----YCWMGCCCTTTCT
TCGACCCCGCCCCTAT-
 A C G T A C G T A C G T A C G T G A C T A G T C C G A T T G C A A C T G A G T C A G T C A G T C A C G T A C G T A C G T A G T C A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.60
Offset:6
Orientation:forward strand
Alignment:YCWMGCCCTTTCT-
------CCTTTGTT
 G A C T A G T C C G A T T G C A A C T G A G T C A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.60
Offset:6
Orientation:forward strand
Alignment:YCWMGCCCTTTCT---
------CCTTTGTTTT
 G A C T A G T C C G A T T G C A A C T G A G T C A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

KLF14/MA0740.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--YCWMGCCCTTTCT
GGCCACGCCCCCTT-
 A C G T A C G T G A C T A G T C C G A T T G C A A C T G A G T C A G T C A G T C A C G T A C G T A C G T A G T C A C G T
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.58
Offset:6
Orientation:forward strand
Alignment:YCWMGCCCTTTCT-
------CCWTTGTY
 G A C T A G T C C G A T T G C A A C T G A G T C A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-YCWMGCCCTTTCT
GCCMCRCCCH----
 A C G T G A C T A G T C C G A T T G C A A C T G A G T C A G T C A G T C A C G T A C G T A C G T A G T C A C G T
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----YCWMGCCCTTTCT
TAAGCCACGCCCCCTTT
 A C G T A C G T A C G T A C G T G A C T A G T C C G A T T G C A A C T G A G T C A G T C A G T C A C G T A C G T A C G T A G T C A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T