Information for 5-ASGGYGCTSGGGTATC (Motif 10)

C G T A A T C G A C T G C A T G A G C T A C T G A G T C A C G T A T G C A C T G A C T G A T C G C G A T G T C A C G A T T A G C
Reverse Opposite:
A T C G C G T A C A G T C G T A A T G C A G T C A G T C A T C G G T C A T A C G G T A C T C G A G T A C A G T C T A G C G C A T
p-value:1e-11
log p-value:-2.639e+01
Information Content per bp:1.673
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif44.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets60.2 +/- 25.3bp
Average Position of motif in Background49.8 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0161.1_Six1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:ASGGYGCTSGGGTATC------
-----GATGGGGTATCATTTTT
 C G T A A T C G A C T G C A T G A G C T A C T G A G T C A C G T A T G C A C T G A C T G A T C G C G A T G T C A C G A T T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PH0165.1_Six6_1/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:ASGGYGCTSGGGTATC------
-----AATAGGGTATCAATTAT
 C G T A A T C G A C T G C A T G A G C T A C T G A G T C A C G T A T G C A C T G A C T G A T C G C G A T G T C A C G A T T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:ASGGYGCTSGGGTATC------
-----AATAGGGTATCATATAT
 C G T A A T C G A C T G C A T G A G C T A C T G A G T C A C G T A T G C A C T G A C T G A T C G C G A T G T C A C G A T T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0162.1_Six2/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ASGGYGCTSGGGTATC------
-----AATGGGGTATCACGTTT
 C G T A A T C G A C T G C A T G A G C T A C T G A G T C A C G T A T G C A C T G A C T G A T C G C G A T G T C A C G A T T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

Six3/MA0631.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:ASGGYGCTSGGGTATC------
-----GATAGGGTATCACTAAT
 C G T A A T C G A C T G C A T G A G C T A C T G A G T C A C G T A T G C A C T G A C T G A T C G C G A T G T C A C G A T T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:ASGGYGCTSGGGTATC------
-----GATAGGGTATCACTAAT
 C G T A A T C G A C T G C A T G A G C T A C T G A G T C A C G T A T G C A C T G A C T G A T C G C G A T G T C A C G A T T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ASGGYGCTSGGGTATC------
-----AATAGGGTATCAATATT
 C G T A A T C G A C T G C A T G A G C T A C T G A G T C A C G T A T G C A C T G A C T G A T C G C G A T G T C A C G A T T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ASGGYGCTSGGGTATC
RGSMTBCTGGGAAAT-
 C G T A A T C G A C T G C A T G A G C T A C T G A G T C A C G T A T G C A C T G A C T G A T C G C G A T G T C A C G A T T A G C
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ASGGYGCTSGGGTATC
NNCGTTGCTATGGNN--
 A C G T C G T A A T C G A C T G C A T G A G C T A C T G A G T C A C G T A T G C A C T G A C T G A T C G C G A T G T C A C G A T T A G C
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ASGGYGCTSGGGTATC
-KGTTGCTAGGMAACA
 C G T A A T C G A C T G C A T G A G C T A C T G A G T C A C G T A T G C A C T G A C T G A T C G C G A T G T C A C G A T T A G C
A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A