Information for 9-CTCCCACCTGACCCTA (Motif 29)

A G T C C G A T A G T C A G T C A G T C C G T A A G T C G T A C A G C T A C T G C G T A A G T C A G T C A G T C A G C T G T C A
Reverse Opposite:
A C G T C T G A C T A G A C T G C T A G C G A T A G T C C T G A C A T G C T A G A C G T A C T G A C T G A C T G C G T A A C T G
p-value:1e-6
log p-value:-1.385e+01
Information Content per bp:1.828
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.6 +/- 30.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1/MA0093.2/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTCCCACCTGACCCTA
--GCCACGTGACC---
 A G T C C G A T A G T C A G T C A G T C C G T A A G T C G T A C A G C T A C T G C G T A A G T C A G T C A G T C A G C T G T C A
A C G T A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTCCCACCTGACCCTA-
----CNNTTGACCTTTG
 A G T C C G A T A G T C A G T C A G T C C G T A A G T C G T A C A G C T A C T G C G T A A G T C A G T C A G T C A G C T G T C A A C G T
A C G T A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTCCCACCTGACCCTA
--ACCACGTGAC----
 A G T C C G A T A G T C A G T C A G T C C G T A A G T C G T A C A G C T A C T G C G T A A G T C A G T C A G T C A G C T G T C A
A C G T A C G T T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCACCTGACCCTA
YCCGCCCACGCN------
 A C G T A C G T A G T C C G A T A G T C A G T C A G T C C G T A A G T C G T A C A G C T A C T G C G T A A G T C A G T C A G T C A G C T G T C A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTCCCACCTGACCCTA
---NCACGTGACN---
 A G T C C G A T A G T C A G T C A G T C C G T A A G T C G T A C A G C T A C T G C G T A A G T C A G T C A G T C A G C T G T C A
A C G T A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCCCACCTGACCCTA
-CCTCACCTG------
 A G T C C G A T A G T C A G T C A G T C C G T A A G T C G T A C A G C T A C T G C G T A A G T C A G T C A G T C A G C T G T C A
A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTCCCACCTGACCCTA
---TCACGTGACCGG-
 A G T C C G A T A G T C A G T C A G T C C G T A A G T C G T A C A G C T A C T G C G T A A G T C A G T C A G T C A G C T G T C A
A C G T A C G T A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTCCCACCTGACCCTA
---TCACGTGACC---
 A G T C C G A T A G T C A G T C A G T C C G T A A G T C G T A C A G C T A C T G C G T A A G T C A G T C A G T C A G C T G T C A
A C G T A C G T A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTCCCACCTGACCCTA
TAAGCCACTTGAAATT-
 A C G T A G T C C G A T A G T C A G T C A G T C C G T A A G T C G T A C A G C T A C T G C G T A A G T C A G T C A G T C A G C T G T C A
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:CTCCCACCTGACCCTA
--------TGACCT--
 A G T C C G A T A G T C A G T C A G T C C G T A A G T C G T A C A G C T A C T G C G T A A G T C A G T C A G T C A G C T G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T