Information for 9-VGCMTGCGYA (Motif 28)

T G A C T C A G T A G C G T C A C A G T A T C G A T G C A C T G G A T C C G T A
Reverse Opposite:
G C A T C T A G T G A C T A C G T A G C G T C A C A G T A T C G A G T C A C T G
p-value:1e-6
log p-value:-1.522e+01
Information Content per bp:1.443
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.33%
Number of Background Sequences with motif498.3
Percentage of Background Sequences with motif1.07%
Average Position of motif in Targets47.3 +/- 27.7bp
Average Position of motif in Background49.0 +/- 35.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-VGCMTGCGYA
GCGCCTGCGCA
 A C G T T G A C T C A G T A G C G T C A C A G T A T C G A T G C A C T G G A T C C G T A
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-VGCMTGCGYA-
GCGCATGCGCAG
 A C G T T G A C T C A G T A G C G T C A C A G T A T C G A T G C A C T G G A T C C G T A A C G T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-VGCMTGCGYA-
GCGCATGCGCAC
 A C G T T G A C T C A G T A G C G T C A C A G T A T C G A T G C A C T G G A T C C G T A A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-VGCMTGCGYA-
CAACGTCCGCGG
 A C G T T G A C T C A G T A G C G T C A C A G T A T C G A T G C A C T G G A T C C G T A A C G T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

ETV5/MA0765.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:VGCMTGCGYA
NACTTCCGGT
 T G A C T C A G T A G C G T C A C A G T A T C G A T G C A C T G G A T C C G T A
G A T C T C G A A G T C C G A T C G A T G T A C G T A C A C T G A T C G G A C T

PB0077.1_Spdef_1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-VGCMTGCGYA-----
GTACATCCGGATTTTT
 A C G T T G A C T C A G T A G C G T C A C A G T A T C G A T G C A C T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-VGCMTGCGYA-
SDGCAGGTGCNS
 A C G T T G A C T C A G T A G C G T C A C A G T A T C G A T G C A C T G G A T C C G T A A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:VGCMTGCGYA
GACAGGTGTN
 T G A C T C A G T A G C G T C A C A G T A T C G A T G C A C T G G A T C C G T A
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:VGCMTGCGYA--
--CSTGGGAAAD
 T G A C T C A G T A G C G T C A C A G T A T C G A T G C A C T G G A T C C G T A A C G T A C G T
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:VGCMTGCGYA
WDNCTGGGCA
 T G A C T C A G T A G C G T C A C A G T A T C G A T G C A C T G G A T C C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A