Information for 6-TAWWAAACAA (Motif 11)

C G A T C G T A C G T A C G T A C G T A C G T A G T C A G T A C C T G A C T G A
Reverse Opposite:
A G C T A G C T A C T G A C G T A C G T A C G T C G A T C G A T A C G T G C T A
p-value:1e-6
log p-value:-1.447e+01
Information Content per bp:1.747
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.77%
Number of Background Sequences with motif1580.3
Percentage of Background Sequences with motif3.26%
Average Position of motif in Targets49.2 +/- 31.0bp
Average Position of motif in Background49.1 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TAWWAAACAA---
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T C G A T C G T A C G T A C G T A C G T A C G T A G T C A G T A C C T G A C T G A A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

HOXD13/MA0909.1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TAWWAAACAA
CCAATAAAAA--
 A C G T A C G T C G A T C G T A C G T A C G T A C G T A C G T A G T C A G T A C C T G A C T G A
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TAWWAAACAA--
AACAAACAACAAGAG
 A C G T A C G T A C G T C G A T C G T A C G T A C G T A C G T A C G T A G T C A G T A C C T G A C T G A A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TAWWAAACAA-
AAATAAGAAAAAAC
 A C G T A C G T A C G T C G A T C G T A C G T A C G T A C G T A C G T A G T C A G T A C C T G A C T G A A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

Arid3a/MA0151.1/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TAWWAAACAA
-ATTAAA---
 C G A T C G T A C G T A C G T A C G T A C G T A G T C A G T A C C T G A C T G A
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TAWWAAACAA
NCYAATAAAA---
 A C G T A C G T A C G T C G A T C G T A C G T A C G T A C G T A C G T A G T C A G T A C C T G A C T G A
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TAWWAAACAA
CCAATAAAAC--
 A C G T A C G T C G A T C G T A C G T A C G T A C G T A C G T A G T C A G T A C C T G A C T G A
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:8
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TAWWAAACAA
GGTAATAAAAA--
 A C G T A C G T A C G T C G A T C G T A C G T A C G T A C G T A C G T A G T C A G T A C C T G A C T G A
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TAWWAAACAA
CCAATAAAAA--
 A C G T A C G T C G A T C G T A C G T A C G T A C G T A C G T A G T C A G T A C C T G A C T G A
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TAWWAAACAA--
-AATAAACAATN
 C G A T C G T A C G T A C G T A C G T A C G T A G T C A G T A C C T G A C T G A A C G T A C G T
A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A