Information for 2-AGACATGAAAGAA (Motif 5)

C G T A A C T G C T G A G T A C C G T A A C G T C T A G T C G A C G T A C T G A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G C T A C G T A C G T A G T C C G T A A C G T A C T G A G C T G T A C A C G T
p-value:1e-10
log p-value:-2.528e+01
Information Content per bp:1.853
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif41.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets45.7 +/- 22.3bp
Average Position of motif in Background46.2 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGACATGAAAGAA
AGAAACGAAAGT-
 C G T A A C T G C T G A G T A C C G T A A C G T C T A G T C G A C G T A C T G A A C T G C G T A C G T A
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGACATGAAAGAA-
AAAGATCAAAGGAA
 C G T A A C T G C T G A G T A C C G T A A C G T C T A G T C G A C G T A C T G A A C T G C G T A C G T A A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0083.1_Tcf7_1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGACATGAAAGAA---
TATAGATCAAAGGAAAA
 A C G T C G T A A C T G C T G A G T A C C G T A A C G T C T A G T C G A C G T A C T G A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGACATGAAAGAA---
NNNAGATCAAAGGANNN
 A C G T C G T A A C T G C T G A G T A C C G T A A C G T C T A G T C G A C G T A C T G A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGACATGAAAGAA---
TATAGATCAAAGGAAAA
 A C G T C G T A A C T G C T G A G T A C C G T A A C G T C T A G T C G A C G T A C T G A A C T G C G T A C G T A A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGACATGAAAGAA-
--ACATCAAAGGNA
 C G T A A C T G C T G A G T A C C G T A A C G T C T A G T C G A C G T A C T G A A C T G C G T A C G T A A C G T
A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGACATGAAAGAA----
-ACTATGAATGAATGAT
 C G T A A C T G C T G A G T A C C G T A A C G T C T A G T C G A C G T A C T G A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGACATGAAAGAA--
-TACTGGAAAAAAAA
 C G T A A C T G C T G A G T A C C G T A A C G T C T A G T C G A C G T A C T G A A C T G C G T A C G T A A C G T A C G T
A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

Tcf7/MA0769.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGACATGAAAGAA
AAAGATCAAAGG-
 C G T A A C T G C T G A G T A C C G T A A C G T C T A G T C G A C G T A C T G A A C T G C G T A C G T A
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGACATGAAAGAA-
AAATAAGAAAAAAC
 C G T A A C T G C T G A G T A C C G T A A C G T C T A G T C G A C G T A C T G A A C T G C G T A C G T A A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C