Information for 2-ACHTCTATTTTGCATA (Motif 3)

C G T A G T A C G T C A A C G T A G T C C G A T C G T A A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T C T G A
Reverse Opposite:
A G C T C G T A A C G T A C T G G T A C C G T A G T C A G T C A C G T A A C G T C G T A A C T G C G T A C A G T C A T G A C G T
p-value:1e-12
log p-value:-2.869e+01
Information Content per bp:1.833
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.2 +/- 21.4bp
Average Position of motif in Background29.8 +/- 7.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ACHTCTATTTTGCATA----
---TNNATTATGCATANNTT
 C G T A G T A C G T C A A C G T A G T C C G A T C G T A A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

PH0144.1_Pou2f2/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ACHTCTATTTTGCATA---
---TNTAATTTGCATANNN
 C G T A G T A C G T C A A C G T A G T C C G A T C G T A A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

POU1F1/MA0784.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:ACHTCTATTTTGCATA--
----CTAATTTGCATATT
 C G T A G T A C G T C A A C G T A G T C C G A T C G T A A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

Pou2f3/MA0627.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACHTCTATTTTGCATA---
---TNTAATTTGCATACNA
 C G T A G T A C G T C A A C G T A G T C C G A T C G T A A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACHTCTATTTTGCATA---
---TNTAATTTGCATACNA
 C G T A G T A C G T C A A C G T A G T C C G A T C G T A A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ACHTCTATTTTGCATA
---TGAATTATGCAT-
 C G T A G T A C G T C A A C G T A G T C C G A T C G T A A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T C T G A
A C G T A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACHTCTATTTTGCATA--
-AATCAATTGTTCCGCTA
 C G T A G T A C G T C A A C G T A G T C C G A T C G T A A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T C T G A A C G T A C G T
A C G T T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

POU3F2/MA0787.1/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ACHTCTATTTTGCATA-
-----TAATTTGCATAA
 C G T A G T A C G T C A A C G T A G T C C G A T C G T A A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ACHTCTATTTTGCATA-
-----TAATTTGCATAA
 C G T A G T A C G T C A A C G T A G T C C G A T C G T A A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

PB0065.1_Sox15_1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACHTCTATTTTGCATA-
ANNTCTATTGTTCNNNA
 C G T A G T A C G T C A A C G T A G T C C G A T C G T A A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T C T G A A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A