Information for 5-CAGGTGGACAAAG (Motif 12)

A G T C C G T A C A T G A T C G C G A T A C T G A C T G G T C A A G T C C G T A C G T A G T C A A C T G
Reverse Opposite:
A G T C A C G T C G A T A C G T A C T G A C G T A G T C A G T C C G T A A T G C G T A C A C G T A C T G
p-value:1e-9
log p-value:-2.123e+01
Information Content per bp:1.843
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.7 +/- 29.1bp
Average Position of motif in Background46.7 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CAGGTGGACAAAG-
----GGAACAAAGR
 A G T C C G T A C A T G A T C G C G A T A C T G A C T G G T C A A G T C C G T A C G T A G T C A A C T G A C G T
A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAGGTGGACAAAG
VCAGCTGBNN----
 A C G T A G T C C G T A C A T G A T C G C G A T A C T G A C T G G T C A A G T C C G T A C G T A G T C A A C T G
T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGACAAAG
AACAGGTGNT-----
 A C G T A C G T A G T C C G T A C A T G A T C G C G A T A C T G A C T G G T C A A G T C C G T A C G T A G T C A A C T G
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGACAAAG
NNCAGGTGNN-----
 A C G T A C G T A G T C C G T A C A T G A T C G C G A T A C T G A C T G G T C A A G T C C G T A C G T A G T C A A C T G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CAGGTGGACAAAG
SDGCAGGTGCNS----
 A C G T A C G T A C G T A G T C C G T A C A T G A T C G C G A T A C T G A C T G G T C A A G T C C G T A C G T A G T C A A C T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CAGGTGGACAAAG
-------ACAAAG
 A G T C C G T A C A T G A T C G C G A T A C T G A C T G G T C A A G T C C G T A C G T A G T C A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CAGGTGGACAAAG
NNVVCAGCTGBN-----
 A C G T A C G T A C G T A C G T A G T C C G T A C A T G A T C G C G A T A C T G A C T G G T C A A G T C C G T A C G T A G T C A A C T G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAGGTGGACAAAG
ATCCACAGGTGCGAAAA-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C A T G A T C G C G A T A C T G A C T G G T C A A G T C C G T A C G T A G T C A A C T G
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGGTGGACAAAG
VCAGGTRDRY----
 A C G T A G T C C G T A C A T G A T C G C G A T A C T G A C T G G T C A A G T C C G T A C G T A G T C A A C T G
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAGGTGGACAAAG-
----VRRACAAWGG
 A G T C C G T A C A T G A T C G C G A T A C T G A C T G G T C A A G T C C G T A C G T A G T C A A C T G A C G T
A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G