Information for 2-TCAAAGGGCA (Motif 7)

A C G T G T A C C G T A C G T A C T G A C A T G A C T G C T A G A G T C C G T A
Reverse Opposite:
A C G T A C T G G A T C A G T C G T A C A G C T A C G T A C G T A C T G T G C A
p-value:1e-11
log p-value:-2.541e+01
Information Content per bp:1.855
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif201.4
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets56.7 +/- 25.3bp
Average Position of motif in Background50.4 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.84
Offset:1
Orientation:forward strand
Alignment:TCAAAGGGCA-
-CAAAGGTCAG
 A C G T G T A C C G T A C G T A C T G A C A T G A C T G C T A G A G T C C G T A A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--TCAAAGGGCA----
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T G T A C C G T A C G T A C T G A C A T G A C T G C T A G A G T C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--TCAAAGGGCA----
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T G T A C C G T A C G T A C T G A C A T G A C T G C T A G A G T C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Nr2f6/MA0677.1/Jaspar

Match Rank:4
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----TCAAAGGGCA
GAGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G T A C T G A C A T G A C T G C T A G A G T C C G T A
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----TCAAAGGGCA
TAGGGCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G T A C T G A C A T G A C T G C T A G A G T C C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TCAAAGGGCA
ANGNAAAGGTCA
 A C G T A C G T A C G T G T A C C G T A C G T A C T G A C A T G A C T G C T A G A G T C C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----TCAAAGGGCA
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G T A C T G A C A T G A C T G C T A G A G T C C G T A
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----TCAAAGGGCA
TGGGGCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G T A C T G A C A T G A C T G C T A G A G T C C G T A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----TCAAAGGGCA
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G T A C T G A C A T G A C T G C T A G A G T C C G T A
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----TCAAAGGGCA
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G T A C T G A C A T G A C T G C T A G A G T C C G T A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A