Information for 3-CAGTAACTCA (Motif 12)

A G T C C T G A C T A G A C G T T C G A G T C A T G A C G A C T T G A C C G T A
Reverse Opposite:
C G A T A C T G C T G A A C T G C A G T A G C T T G C A A G T C G A C T T C A G
p-value:1e-8
log p-value:-1.928e+01
Information Content per bp:1.631
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif9.54%
Number of Background Sequences with motif2272.0
Percentage of Background Sequences with motif4.66%
Average Position of motif in Targets55.9 +/- 25.9bp
Average Position of motif in Background49.7 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOSL1/MA0477.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CAGTAACTCA--
-GGTGACTCATG
 A G T C C T G A C T A G A C G T T C G A G T C A T G A C G A C T T G A C C G T A A C G T A C G T
A C G T C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

JUNB/MA0490.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CAGTAACTCA-
GGATGACTCAT
 A G T C C T G A C T A G A C G T T C G A G T C A T G A C G A C T T G A C C G T A A C G T
C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CAGTAACTCA-
GGATGACTCAT
 A G T C C T G A C T A G A C G T T C G A G T C A T G A C G A C T T G A C C G T A A C G T
A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T

JUND/MA0491.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAGTAACTCA--
-GGTGACTCATC
 A G T C C T G A C T A G A C G T T C G A G T C A T G A C G A C T T G A C C G T A A C G T A C G T
A C G T C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CAGTAACTCA
NACAGGAAAT--
 A C G T A C G T A G T C C T G A C T A G A C G T T C G A G T C A T G A C G A C T T G A C C G T A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGTAACTCA-
NCTGTCAATCAN
 A C G T A G T C C T G A C T A G A C G T T C G A G T C A T G A C G A C T T G A C C G T A A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

FOS::JUN/MA0099.2/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CAGTAACTCA
---TGACTCA
 A G T C C T G A C T A G A C G T T C G A G T C A T G A C G A C T T G A C C G T A
A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGTAACTCA-
SCTGTCAVTCAV
 A C G T A G T C C T G A C T A G A C G T T C G A G T C A T G A C G A C T T G A C C G T A A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAGTAACTCA--
--ATGACTCATC
 A G T C C T G A C T A G A C G T T C G A G T C A T G A C G A C T T G A C C G T A A C G T A C G T
A C G T A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

FOS/MA0476.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAGTAACTCA--
-TGTGACTCATT
 A G T C C T G A C T A G A C G T T C G A G T C A T G A C G A C T T G A C C G T A A C G T A C G T
A C G T C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T