Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-6 | -1.461e+01 | 0.0002 | 33.0 | 4.46% | 807.4 | 1.65% | motif file (matrix) |
svg |
2 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-5 | -1.332e+01 | 0.0003 | 10.0 | 1.35% | 90.8 | 0.19% | motif file (matrix) |
svg |
3 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-4 | -1.110e+01 | 0.0018 | 22.0 | 2.97% | 507.4 | 1.03% | motif file (matrix) |
svg |
4 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.049e+01 | 0.0025 | 17.0 | 2.30% | 343.2 | 0.70% | motif file (matrix) |
svg |
5 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-4 | -1.038e+01 | 0.0025 | 76.0 | 10.27% | 3109.7 | 6.34% | motif file (matrix) |
svg |
6 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-4 | -1.033e+01 | 0.0025 | 9.0 | 1.22% | 102.8 | 0.21% | motif file (matrix) |
svg |
7 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-4 | -1.014e+01 | 0.0025 | 87.0 | 11.76% | 3721.9 | 7.59% | motif file (matrix) |
svg |
8 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.313e+00 | 0.0041 | 81.0 | 10.95% | 3485.1 | 7.11% | motif file (matrix) |
svg |
9 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-3 | -8.996e+00 | 0.0050 | 61.0 | 8.24% | 2454.3 | 5.00% | motif file (matrix) |
svg |
10 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-3 | -8.748e+00 | 0.0058 | 40.0 | 5.41% | 1416.2 | 2.89% | motif file (matrix) |
svg |
11 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-3 | -8.511e+00 | 0.0067 | 80.0 | 10.81% | 3520.5 | 7.18% | motif file (matrix) |
svg |
12 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-3 | -8.383e+00 | 0.0069 | 54.0 | 7.30% | 2147.2 | 4.38% | motif file (matrix) |
svg |
13 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-3 | -7.840e+00 | 0.0110 | 78.0 | 10.54% | 3489.8 | 7.12% | motif file (matrix) |
svg |
14 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.745e+00 | 0.0113 | 41.0 | 5.54% | 1540.2 | 3.14% | motif file (matrix) |
svg |
15 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-3 | -7.694e+00 | 0.0113 | 4.0 | 0.54% | 23.1 | 0.05% | motif file (matrix) |
svg |
16 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-3 | -7.674e+00 | 0.0113 | 27.0 | 3.65% | 871.6 | 1.78% | motif file (matrix) |
svg |
17 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-3 | -7.616e+00 | 0.0113 | 32.0 | 4.32% | 1109.8 | 2.26% | motif file (matrix) |
svg |
18 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-3 | -7.397e+00 | 0.0124 | 59.0 | 7.97% | 2506.5 | 5.11% | motif file (matrix) |
svg |
19 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-3 | -7.240e+00 | 0.0137 | 55.0 | 7.43% | 2309.5 | 4.71% | motif file (matrix) |
svg |
20 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-2 | -6.602e+00 | 0.0247 | 27.0 | 3.65% | 938.8 | 1.91% | motif file (matrix) |
svg |
21 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -6.527e+00 | 0.0254 | 32.0 | 4.32% | 1187.3 | 2.42% | motif file (matrix) |
svg |
22 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-2 | -6.229e+00 | 0.0326 | 80.0 | 10.81% | 3813.9 | 7.78% | motif file (matrix) |
svg |
23 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -6.192e+00 | 0.0326 | 36.0 | 4.86% | 1416.2 | 2.89% | motif file (matrix) |
svg |
24 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-2 | -6.103e+00 | 0.0339 | 16.0 | 2.16% | 463.6 | 0.95% | motif file (matrix) |
svg |
25 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-2 | -6.096e+00 | 0.0339 | 158.0 | 21.35% | 8456.3 | 17.24% | motif file (matrix) |
svg |
26 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -6.027e+00 | 0.0339 | 88.0 | 11.89% | 4302.3 | 8.77% | motif file (matrix) |
svg |
27 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-2 | -5.726e+00 | 0.0439 | 85.0 | 11.49% | 4176.5 | 8.52% | motif file (matrix) |
svg |
28 |
| PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.686e+00 | 0.0441 | 69.0 | 9.32% | 3266.3 | 6.66% | motif file (matrix) |
svg |
29 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-2 | -5.478e+00 | 0.0525 | 73.0 | 9.86% | 3524.7 | 7.19% | motif file (matrix) |
svg |
30 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-2 | -5.440e+00 | 0.0526 | 41.0 | 5.54% | 1750.3 | 3.57% | motif file (matrix) |
svg |
31 |
| Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer | 1e-2 | -5.163e+00 | 0.0672 | 11.0 | 1.49% | 293.4 | 0.60% | motif file (matrix) |
svg |
32 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-2 | -4.912e+00 | 0.0837 | 10.0 | 1.35% | 262.8 | 0.54% | motif file (matrix) |
svg |
33 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-2 | -4.645e+00 | 0.1060 | 118.0 | 15.95% | 6337.5 | 12.92% | motif file (matrix) |
svg |
34 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-2 | -4.628e+00 | 0.1060 | 18.0 | 2.43% | 639.4 | 1.30% | motif file (matrix) |
svg |