Information for 22-TAYTTTACMMYCA (Motif 47)

A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C G T C A G T C A A G C T A G T C C G T A
Reverse Opposite:
A C G T C T A G C T G A A C G T A C G T A C T G A C G T C G T A C G T A C G T A T C A G A C G T C G T A
p-value:1e-5
log p-value:-1.287e+01
Information Content per bp:1.874
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.5 +/- 23.8bp
Average Position of motif in Background47.5 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC12/MA0906.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TAYTTTACMMYCA
-NTTTTACGACC-
 A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C G T C A G T C A A G C T A G T C C G T A
A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TAYTTTACMMYCA
-NTTTTACGACC-
 A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C G T C A G T C A A G C T A G T C C G T A
A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAYTTTACMMYCA--
NNNATTTTACGACNNTN
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C G T C A G T C A A G C T A G T C C G T A A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

HOXD11/MA0908.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAYTTTACMMYCA
-NTTTTACGAC--
 A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C G T C A G T C A A G C T A G T C C G T A
A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TAYTTTACMMYCA
ANTTTTACGACC-
 A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C G T C A G T C A A G C T A G T C C G T A
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TAYTTTACMMYCA
DGWTTTATGRCN-
 A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C G T C A G T C A A G C T A G T C C G T A
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TAYTTTACMMYCA
-NTTTTACGACT-
 A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C G T C A G T C A A G C T A G T C C G T A
A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TAYTTTACMMYCA--
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C G T C A G T C A A G C T A G T C C G T A A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

PH0066.1_Hoxc11/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAYTTTACMMYCA--
NNNTTTTACGACNTTN
 A C G T A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C G T C A G T C A A G C T A G T C C G T A A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

PH0076.1_Hoxd11/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TAYTTTACMMYCA--
ANNATTTTACGACNTNA
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T C G T A A G T C G T C A G T C A A G C T A G T C C G T A A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A