Information for 5-CAATCACACG (Motif 36)

A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A T A G C A C T G
Reverse Opposite:
T G A C A T C G A C G T A T C G A C G T A C T G C T G A A C G T A C G T A C T G
p-value:1e-8
log p-value:-1.891e+01
Information Content per bp:1.864
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif80.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets52.4 +/- 21.9bp
Average Position of motif in Background50.7 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CAATCACACG
CCAATCAA---
 A C G T A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A T A G C A C T G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CAATCACACG
CAAATCACTG-
 A C G T A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A T A G C A C T G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CAATCACACG
CCATCAATCAAA--
 A C G T A C G T A C G T A C G T A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A T A G C A C T G
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CAATCACACG-
---TCACACCT
 A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A T A G C A C T G A C G T
A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CAATCACACG-
---TCACACCT
 A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A T A G C A C T G A C G T
A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.65
Offset:-8
Orientation:forward strand
Alignment:--------CAATCACACG
AAATGGACCAATCAG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A T A G C A C T G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAATCACACG-
NWAACCACADNN
 A C G T A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A T A G C A C T G A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAATCACACG
AAACCACANN
 A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A T A G C A C T G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CAATCACACG
SCTGTCAVTCAV---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A T A G C A C T G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAATCACACG
NAAACCACAG-
 A C G T A G T C C G T A G T C A A G C T A G T C C G T A A T G C C G T A T A G C A C T G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T