Information for 19-TGGTTTTGAATTTGTT (Motif 32)

A C G T A C T G C T A G A G C T A C G T A C G T A C G T A C T G C G T A C T G A A C G T A C G T A C G T C T A G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A C G T A C G T A A G C T A C G T A G T C C G T A C G T A C G T A C T G A A G T C G T A C C G T A
p-value:1e-8
log p-value:-1.997e+01
Information Content per bp:1.929
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.8 +/- 11.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TGGTTTTGAATTTGTT
---ATTTGAATT----
 A C G T A C T G C T A G A G C T A C G T A C G T A C G T A C T G C G T A C T G A A C G T A C G T A C G T C T A G A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TGGTTTTGAATTTGTT
----TTTGAAACCG--
 A C G T A C T G C T A G A G C T A C G T A C G T A C G T A C T G C G T A C T G A A C G T A C G T A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGTTTTGAATTTGTT
NNNTATTGAATTGNNN
 A C G T A C T G C T A G A G C T A C G T A C G T A C G T A C T G C G T A C T G A A C G T A C G T A C G T C T A G A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PB0171.1_Sox18_2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGGTTTTGAATTTGTT--
--GGACTGAATTCATGCC
 A C G T A C T G C T A G A G C T A C G T A C G T A C G T A C T G C G T A C T G A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGGTTTTGAATTTGTT
NNTTTTGTTTTGATNT----
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A G C T A C G T A C G T A C G T A C T G C G T A C T G A A C G T A C G T A C G T C T A G A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T A C G T A C G T A C G T

PH0172.1_Tlx2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGTTTTGAATTTGTT-
AANTTATTAATTAATTA
 A C G T A C T G C T A G A G C T A C G T A C G T A C G T A C T G C G T A C T G A A C G T A C G T A C G T C T A G A C G T A C G T A C G T
G C A T C G T A C T A G G A C T G C A T C G T A C G A T G A C T C G T A C G T A G C A T C G A T C T G A G C T A G A C T C G A T T G C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGGTTTTGAATTTGTT
--CCTTTGATGT----
 A C G T A C T G C T A G A G C T A C G T A C G T A C G T A C T G C G T A C T G A A C G T A C G T A C G T C T A G A C G T A C G T
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TGGTTTTGAATTTGTT
-----TTGACTTTT--
 A C G T A C T G C T A G A G C T A C G T A C G T A C G T A C T G C G T A C T G A A C G T A C G T A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGGTTTTGAATTTGTT
TNCCTTTGATCTTN--
 A C G T A C T G C T A G A G C T A C G T A C G T A C G T A C T G C G T A C T G A A C G T A C G T A C G T C T A G A C G T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T A C G T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TGGTTTTGAATTTGTT---
---NNNTTAATTGGTTTTN
 A C G T A C T G C T A G A G C T A C G T A C G T A C G T A C T G C G T A C T G A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G