Information for 18-AGCTAGGRAACATAAA (Motif 31)

C T G A T C A G G T A C G C A T C T G A A C T G A C T G C T A G T C G A C T G A G T A C C T G A C A G T C T G A C G T A G T C A
Reverse Opposite:
C A G T A C G T A G C T G T C A A G C T C A T G A G C T A C G T G A T C A G T C A G T C G A C T C G T A C A T G A G T C A G C T
p-value:1e-8
log p-value:-2.007e+01
Information Content per bp:1.689
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif43.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets64.5 +/- 18.3bp
Average Position of motif in Background46.2 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AGCTAGGRAACATAAA----
-----GGAAANTGAAACTNA
 C T G A T C A G G T A C G C A T C T G A A C T G A C T G C T A G T C G A C T G A G T A C C T G A C A G T C T G A C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PB0115.1_Ehf_2/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCTAGGRAACATAAA
AAGATCGGAANTNNNA-
 A C G T C T G A T C A G G T A C G C A T C T G A A C T G A C T G C T A G T C G A C T G A G T A C C T G A C A G T C T G A C G T A G T C A
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AGCTAGGRAACATAAA
-----TGGAACAGMA-
 C T G A T C A G G T A C G C A T C T G A A C T G A C T G C T A G T C G A C T G A G T A C C T G A C A G T C T G A C G T A G T C A
A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AGCTAGGRAACATAAA--
------GAAAMTGAAACT
 C T G A T C A G G T A C G C A T C T G A A C T G A C T G C T A G T C G A C T G A G T A C C T G A C A G T C T G A C G T A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGCTAGGRAACATAAA
KGTTGCTAGGMAACA----
 A C G T A C G T A C G T C T G A T C A G G T A C G C A T C T G A A C T G A C T G C T A G T C G A C T G A G T A C C T G A C A G T C T G A C G T A G T C A
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AGCTAGGRAACATAAA--
------GWAAYHTGAKMC
 C T G A T C A G G T A C G C A T C T G A A C T G A C T G C T A G T C G A C T G A G T A C C T G A C A G T C T G A C G T A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

PB0186.1_Tcf3_2/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGCTAGGRAACATAAA--
---AGCCGAAAAAAAAAT
 C T G A T C A G G T A C G C A T C T G A A C T G A C T G C T A G T C G A C T G A G T A C C T G A C A G T C T G A C G T A G T C A A C G T A C G T
A C G T A C G T A C G T C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGCTAGGRAACATAAA
--CAAGGHCANV----
 C T G A T C A G G T A C G C A T C T G A A C T G A C T G C T A G T C G A C T G A G T A C C T G A C A G T C T G A C G T A G T C A
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:9
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AGCTAGGRAACATAAA--
------GRAASTGAAAST
 C T G A T C A G G T A C G C A T C T G A A C T G A C T G C T A G T C G A C T G A G T A C C T G A C A G T C T G A C G T A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AGCTAGGRAACATAAA--
------GAAACTGAAACT
 C T G A T C A G G T A C G C A T C T G A A C T G A C T G C T A G T C G A C T G A G T A C C T G A C A G T C T G A C G T A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T