Information for 13-AAGTTAARKCTTAATA (Motif 19)

C G T A C T G A C A T G A C G T A C G T G T C A C G T A C T A G A C T G A G T C A C G T C G A T G C T A C G T A A C G T G C T A
Reverse Opposite:
C G A T C G T A A C G T C A G T G C T A G T C A C T A G G T A C A G T C A C G T A C G T C G T A C G T A G A T C A G C T C G A T
p-value:1e-10
log p-value:-2.350e+01
Information Content per bp:1.747
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.3 +/- 31.2bp
Average Position of motif in Background51.5 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AAGTTAARKCTTAATA
-GGTTAAACATTAA--
 C G T A C T G A C A T G A C G T A C G T G T C A C G T A C T A G A C T G A G T C A C G T C G A T G C T A C G T A A C G T G C T A
A C G T C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAGTTAARKCTTAATA
-NGTTAATNATTAACN
 C G T A C T G A C A T G A C G T A C G T G T C A C G T A C T A G A C T G A G T C A C G T C G A T G C T A C G T A A C G T G C T A
A C G T C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

HNF1B/MA0153.2/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAGTTAARKCTTAATA
--GTTAATGATTAAC-
 C G T A C T G A C A T G A C G T A C G T G T C A C G T A C T A G A C T G A G T C A C G T C G A T G C T A C G T A A C G T G C T A
A C G T A C G T C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAGTTAARKCTTAATA
--GTTAATNATTAA--
 C G T A C T G A C A T G A C G T A C G T G T C A C G T A C T A G A C T G A G T C A C G T C G A T G C T A C G T A A C G T G C T A
A C G T A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAGTTAARKCTTAATA
ACTAGTTAAC--------
 A C G T A C G T C G T A C T G A C A T G A C G T A C G T G T C A C G T A C T A G A C T G A G T C A C G T C G A T G C T A C G T A A C G T G C T A
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AAGTTAARKCTTAATA
NNNTTAGTTAACTNANN---
 A C G T A C G T A C G T A C G T C G T A C T G A C A T G A C G T A C G T G T C A C G T A C T A G A C T G A G T C A C G T C G A T G C T A C G T A A C G T G C T A
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T A C G T A C G T A C G T

MYBL1/MA0776.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AAGTTAARKCTTAATA
ACCGTTAACGGT-----
 A C G T C G T A C T G A C A T G A C G T A C G T G T C A C G T A C T A G A C T G A G T C A C G T C G A T G C T A C G T A A C G T G C T A
C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T A C G T A C G T A C G T A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----AAGTTAARKCTTAATA
NTTTTAGTTAACNNAGN---
 A C G T A C G T A C G T A C G T C G T A C T G A C A T G A C G T A C G T G T C A C G T A C T A G A C T G A G T C A C G T C G A T G C T A C G T A A C G T G C T A
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:AAGTTAARKCTTAATA
---------TTTAAT-
 C G T A C T G A C A T G A C G T A C G T G T C A C G T A C T A G A C T G A G T C A C G T C G A T G C T A C G T A A C G T G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:forward strand
Alignment:AAGTTAARKCTTAATA--
-------ATATTAATTAA
 C G T A C T G A C A T G A C G T A C G T G T C A C G T A C T A G A C T G A G T C A C G T C G A T G C T A C G T A A C G T G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A