Information for 9-CWAAGCCAAAGAAWAA (Motif 15)

A G T C G C A T T C G A C G T A A C T G G A T C A G T C C G T A C G T A C G T A C T A G C T G A C T G A G C A T G T C A C G T A
Reverse Opposite:
A C G T A C G T C G T A A G C T A G C T A G T C A C G T A C G T A C G T A C T G C A T G G T A C C G A T A G C T C G T A C T A G
p-value:1e-11
log p-value:-2.578e+01
Information Content per bp:1.721
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.6 +/- 21.2bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CWAAGCCAAAGAAWAA
AAACAGACAAAGGAAT-
 A C G T A G T C G C A T T C G A C G T A A C T G G A T C A G T C C G T A C G T A C G T A C T A G C T G A C T G A G C A T G T C A C G T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CWAAGCCAAAGAAWAA
---TGCCAA-------
 A G T C G C A T T C G A C G T A A C T G G A T C A G T C C G T A C G T A C G T A C T A G C T G A C T G A G C A T G T C A C G T A
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CWAAGCCAAAGAAWAA
-CGTGCCAAG------
 A G T C G C A T T C G A C G T A A C T G G A T C A G T C C G T A C G T A C G T A C T A G C T G A C T G A G C A T G T C A C G T A
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CWAAGCCAAAGAAWAA--
---AGCCGAAAAAAAAAT
 A G T C G C A T T C G A C G T A A C T G G A T C A G T C C G T A C G T A C G T A C T A G C T G A C T G A G C A T G T C A C G T A A C G T A C G T
A C G T A C G T A C G T C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CWAAGCCAAAGAAWAA
--AAAACAAAGG----
 A G T C G C A T T C G A C G T A A C T G G A T C A G T C C G T A C G T A C G T A C T A G C T G A C T G A G C A T G T C A C G T A
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CWAAGCCAAAGAAWAA
ACTAGCCAATCA----
 A G T C G C A T T C G A C G T A A C T G G A T C A G T C C G T A C G T A C G T A C T A G C T G A C T G A G C A T G T C A C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CWAAGCCAAAGAAWAA---
---TGCCAAAATAAACANN
 A G T C G C A T T C G A C G T A A C T G G A T C A G T C C G T A C G T A C G T A C T A G C T G A C T G A G C A T G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CWAAGCCAAAGAAWAA---
----AACAAACAACAAGAG
 A G T C G C A T T C G A C G T A A C T G G A T C A G T C C G T A C G T A C G T A C T A G C T G A C T G A G C A T G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CWAAGCCAAAGAAWAA
AGAAGAACAAAGGACTA
 A C G T A G T C G C A T T C G A C G T A A C T G G A T C A G T C C G T A C G T A C G T A C T A G C T G A C T G A G C A T G T C A C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CWAAGCCAAAGAAWAA
AAAAGTCAA-------
 A G T C G C A T T C G A C G T A A C T G G A T C A G T C C G T A C G T A C G T A C T A G C T G A C T G A G C A T G T C A C G T A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T