Information for 10-TTGGAGTTGG (Motif 24)

A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A G T C A C G T A G T C A G T C C G T A C G T A
p-value:1e-3
log p-value:-7.971e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets95.0 +/- 0.0bp
Average Position of motif in Background62.3 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTGGAGTTGG-----
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTGGAGTTGG---
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

PB0150.1_Mybl1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTGGAGTTGG---
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTGGAGTTGG---
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTGGAGTTGG
TGGCAGTTGG
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C T G A C T G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTGGAGTTGG-----
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TTGGAGTTGG--
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTGGAGTTGG
TGGCAGTTGN
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C T G A C T G
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TTGGAGTTGG--
------TTGGCA
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTGGAGTTGG
TTTGCGGTTT-
 A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C T G A C T G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T