Information for 2-WTTTMTYYWYWYARKA (Motif 2)

C G A T A C G T A C G T A C G T G T C A A C G T A G T C A G C T C G A T A G T C C G A T A G C T C G T A C T G A A C G T C G T A
Reverse Opposite:
A C G T G T C A A G C T A C G T C T G A C G T A C T A G C G T A C T G A C T A G C G T A A C G T C G T A C G T A C G T A C G T A
p-value:1e-5
log p-value:-1.318e+01
Information Content per bp:1.775
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif66.67%
Number of Background Sequences with motif69.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets27.7 +/- 23.0bp
Average Position of motif in Background48.5 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---WTTTMTYYWYWYARKA-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T C G A T A C G T A C G T A C G T G T C A A C G T A G T C A G C T C G A T A G T C C G A T A G C T C G T A C T G A A C G T C G T A A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---WTTTMTYYWYWYARKA-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T C G A T A C G T A C G T A C G T G T C A A C G T A G T C A G C T C G A T A G T C C G A T A G C T C G T A C T G A A C G T C G T A A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

FOXC2/MA0846.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:WTTTMTYYWYWYARKA
-TTTGTTTACTTA---
 C G A T A C G T A C G T A C G T G T C A A C G T A G T C A G C T C G A T A G T C C G A T A G C T C G T A C T G A A C G T C G T A
A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-WTTTMTYYWYWYARKA
TTTTTTTTCNNGTN---
 A C G T C G A T A C G T A C G T A C G T G T C A A C G T A G T C A G C T C G A T A G T C C G A T A G C T C G T A C T G A A C G T C G T A
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--WTTTMTYYWYWYARKA
NNNTTTGTTTACTTTTN-
 A C G T A C G T C G A T A C G T A C G T A C G T G T C A A C G T A G T C A G C T C G A T A G T C C G A T A G C T C G T A C T G A A C G T C G T A
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----WTTTMTYYWYWYARKA
NNNNTTTTTTTTTNAAC----
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T G T C A A C G T A G T C A G C T C G A T A G T C C G A T A G C T C G T A C T G A A C G T C G T A
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:WTTTMTYYWYWYARKA
--ATATTTACATA---
 C G A T A C G T A C G T A C G T G T C A A C G T A G T C A G C T C G A T A G T C C G A T A G C T C G T A C T G A A C G T C G T A
A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:WTTTMTYYWYWYARKA
CTTTGTTTACTTTTN-
 C G A T A C G T A C G T A C G T G T C A A C G T A G T C A G C T C G A T A G T C C G A T A G C T C G T A C T G A A C G T C G T A
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:WTTTMTYYWYWYARKA
--ATATTTACATA---
 C G A T A C G T A C G T A C G T G T C A A C G T A G T C A G C T C G A T A G T C C G A T A G C T C G T A C T G A A C G T C G T A
A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----WTTTMTYYWYWYARKA
NNANTTTTATTGGNNN----
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T G T C A A C G T A G T C A G C T C G A T A G T C C G A T A G C T C G T A C T G A A C G T C G T A
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T A C G T A C G T A C G T