Information for 13-AAGAATTGTGTTA (Motif 14)

C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A G T C A C G T A C G T
p-value:1e-4
log p-value:-1.027e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AAGAATTGTGTTA--
-AAAATTGTTATGAA
 C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C G T C G T A A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAGAATTGTGTTA--
GGAAAAATTGTTAGGAA
 A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C G T C G T A A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAGAATTGTGTTA-
NNNCCATTGTGTNAN
 A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C G T C G T A A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0067.1_Sox18_1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAGAATTGTGTTA---
TTCAATTGTTCTAAAA
 C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

Phox2b/MA0681.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAGAATTGTGTTA
--TAATTAAATTA
 C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C G T C G T A
A C G T A C G T G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A

PHOX2A/MA0713.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AAGAATTGTGTTA
--TAATTAAATTA
 C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C G T C G T A
A C G T A C G T G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AAGAATTGTGTTA
----ATTGTTTAN
 C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C G T C G T A
A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0066.1_Sox17_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAGAATTGTGTTA
NNATNAATTGTTTNN
 A C G T A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C G T C G T A
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAGAATTGTGTTA--
AANTTATTGTTCTNNA
 A C G T C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C G T C G T A A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAGAATTGTGTTA
--CCATTGTTNY-
 C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C G T C G T A
A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T