Information for 12-CCATAGAGTGTGT (Motif 13)

A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A G T C C G T A A G T C A C G T A G T C A C G T C G T A A C G T A C T G A C T G
p-value:1e-4
log p-value:-1.027e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCATAGAGTGTGT------
---NNGCGTGTGTGCNGCN
 A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCATAGAGTGTGT
---TTRAGTGSYK
 A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCATAGAGTGTGT
---TTGAGTGSTT
 A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCATAGAGTGTGT
--BTBRAGTGSN-
 A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCATAGAGTGTGT--
---NTGGGTGTGGCC
 A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

Klf1/MA0493.1/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CCATAGAGTGTGT--
----TGGGTGTGGCN
 A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCATAGAGTGTGT-
TCAGNGAGCGTGAC
 A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCATAGAGTGTGT
--CTTGAGTGGCT
 A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCATAGAGTGTGT--
---GGGGGTGTGTCC
 A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CCATAGAGTGTGT
--CTYRAGTGSY-
 A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T