Information for 9-TCCACATATTTAT (Motif 10)

A C G T A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C T G A C G T A C T G A C T G C G T A
p-value:1e-4
log p-value:-1.027e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCCACATATTTAT
---GHATATKCAT
 A C G T A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCCACATATTTAT
ATCCAC--------
 A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCCACATATTTAT
---GAATATTCAT
 A C G T A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

FOXL1/MA0033.2/Jaspar

Match Rank:4
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TCCACATATTTAT
------TGTTTAC
 A C G T A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TCCACATATTTAT---
-----ATATTTACATA
 A C G T A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TCCACATATTTAT--
------TGTTTATTT
 A C G T A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

FOXB1/MA0845.1/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TCCACATATTTAT---
-----ATATTTACATA
 A C G T A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

ZBTB18/MA0698.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCCACATATTTAT
CATCCAGATGTTC--
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TCCACATATTTAT
------TGTTTAC
 A C G T A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCCACATATTTAT
SSAATCCACANN-----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T A C G T A C G T