Information for 4-TTATGGCAGT (Motif 5)

A C G T A G C T C T G A G A C T A C T G C A T G A G T C C G T A C T A G G A C T
Reverse Opposite:
C T G A A G T C A C G T A C T G G T A C A G T C C T G A A G C T T C G A C G T A
p-value:1e-12
log p-value:-2.969e+01
Information Content per bp:1.846
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif70.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets47.5 +/- 29.4bp
Average Position of motif in Background55.6 +/- 37.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myb/MA0100.2/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:TTATGGCAGT---
---TGGCAGTTGN
 A C G T A G C T C T G A G A C T A C T G C A T G A G T C C G T A C T A G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTATGGCAGT------
NNNTGGCAGTTGGTNN
 A C G T A G C T C T G A G A C T A C T G C A T G A G T C C G T A C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TTATGGCAGT---
---TGGCAGTTGG
 A C G T A G C T C T G A G A C T A C T G C A T G A G T C C G T A C T A G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTATGGCAGT
TNNGGGCAG-
 A C G T A G C T C T G A G A C T A C T G C A T G A G T C C G T A C T A G G A C T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTATGGCAGT
TTTTATGGCTN-
 A C G T A C G T A C G T A G C T C T G A G A C T A C T G C A T G A G T C C G T A C T A G G A C T
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T

YY2/MA0748.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTATGGCAGT-
TAATGGCGGNC
 A C G T A G C T C T G A G A C T A C T G C A T G A G T C C G T A C T A G G A C T A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PH0056.1_Hoxa9/Jaspar

Match Rank:7
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------TTATGGCAGT
ANTAATTTTATGGCCGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T G A G A C T A C T G C A T G A G T C C G T A C T A G G A C T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTATGGCAGT
NTTTTATGAC---
 A C G T A C G T A C G T A C G T A G C T C T G A G A C T A C T G C A T G A G T C C G T A C T A G G A C T
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTATGGCAGT-----
NNNNTGCCAGTGATTG
 A C G T A C G T A G C T C T G A G A C T A C T G C A T G A G T C C G T A C T A G G A C T A C G T A C G T A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

CDX1/MA0878.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTATGGCAGT
TTTTATTGC---
 A C G T A C G T A C G T A G C T C T G A G A C T A C T G C A T G A G T C C G T A C T A G G A C T
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T