Information for 9-TAATCGCTGC (Motif 16)

A C G T C T G A C T G A A C G T A G T C A T C G A G T C A C G T A C T G A T G C
Reverse Opposite:
A T C G A G T C C G T A A C T G A T G C T C A G C G T A A G C T G A C T C G T A
p-value:1e-9
log p-value:-2.281e+01
Information Content per bp:1.864
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif25.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets47.7 +/- 17.5bp
Average Position of motif in Background53.0 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TAATCGCTGC
CTAATCGNT--
 A C G T A C G T C T G A C T G A A C G T A G T C A T C G A G T C A C G T A C T G A T G C
G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TAATCGCTGC
AAATCACTGC
 A C G T C T G A C T G A A C G T A G T C A T C G A G T C A C G T A C T G A T G C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

Hmx1/MA0896.1/Jaspar

Match Rank:3
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------TAATCGCTGC-
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A G T C A T C G A G T C A C G T A C T G A T G C A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:4
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------TAATCGCTGC-
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A G T C A T C G A G T C A C G T A C T G A T G C A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

BARX1/MA0875.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAATCGCTGC
NTAATTGN---
 A C G T A C G T C T G A C T G A A C G T A G T C A T C G A G T C A C G T A C T G A T G C
A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:6
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------TAATCGCTGC-
ATTNNTTAATTGCTTGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A G T C A T C G A G T C A C G T A C T G A T G C A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:7
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------TAATCGCTGC-
ATTNNTTAATTGCTTGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A G T C A T C G A G T C A C G T A C T G A T G C A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAATCGCTGC
GTTAATGGCC--
 A C G T A C G T A C G T C T G A C T G A A C G T A G T C A T C G A G T C A C G T A C T G A T G C
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TAATCGCTGC
GCTAATCCCC--
 A C G T A C G T A C G T C T G A C T G A A C G T A G T C A T C G A G T C A C G T A C T G A T G C
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TAATCGCTGC
GCTAATTGCT--
 A C G T A C G T A C G T C T G A C T G A A C G T A G T C A T C G A G T C A C G T A C T G A T G C
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T A C G T