Information for 1-CTWRTAAKGTTYA (Motif 5)

G A T C C A G T C G T A C T G A A C G T C G T A C G T A A C G T T A C G A C G T A C G T A G T C C G T A
Reverse Opposite:
C G A T C T A G C G T A C G T A A T G C G T C A A C G T A C G T C G T A A G C T C G A T G C T A C A T G
p-value:1e-8
log p-value:-1.849e+01
Information Content per bp:1.745
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif26.67%
Number of Background Sequences with motif73.5
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets45.5 +/- 24.3bp
Average Position of motif in Background55.9 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTWRTAAKGTTYA--
-NNGTANTGTTTTNC
 G A T C C A G T C G T A C T G A A C G T C G T A C G T A A C G T T A C G A C G T A C G T A G T C C G T A A C G T A C G T
A C G T G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CTWRTAAKGTTYA
----CAAGCTT--
 G A T C C A G T C G T A C T G A A C G T C G T A C G T A A C G T T A C G A C G T A C G T A G T C C G T A
A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTWRTAAKGTTYA---
---TTAATGTTTAACC
 G A T C C A G T C G T A C T G A A C G T C G T A C G T A A C G T T A C G A C G T A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTWRTAAKGTTYA----
---CTAATATTGCTAAA
 G A T C C A G T C G T A C T G A A C G T C G T A C G T A A C G T T A C G A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTWRTAAKGTTYA----
---CTAATATTGCTAAA
 G A T C C A G T C G T A C T G A A C G T C G T A C G T A A C G T T A C G A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0079.1_Sry_1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTWRTAAKGTTYA
TATAATTATAATATTC-
 A C G T A C G T A C G T A C G T G A T C C A G T C G T A C T G A A C G T C G T A C G T A A C G T T A C G A C G T A C G T A G T C C G T A
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CTWRTAAKGTTYA--
----TATTGTTTATT
 G A T C C A G T C G T A C T G A A C G T C G T A C G T A A C G T T A C G A C G T A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

PB0174.1_Sox30_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTWRTAAKGTTYA
NCGTATTATAATCNTA-
 A C G T A C G T A C G T A C G T G A T C C A G T C G T A C T G A A C G T C G T A C G T A A C G T T A C G A C G T A C G T A G T C C G T A
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTWRTAAKGTTYA
---NTAATKGTTT
 G A T C C A G T C G T A C T G A A C G T C G T A C G T A A C G T T A C G A C G T A C G T A G T C C G T A
A C G T A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTWRTAAKGTTYA--
---TTAATNATTAAC
 G A T C C A G T C G T A C T G A A C G T C G T A C G T A A C G T T A C G A C G T A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C