Information for 19-GTTGGATTGA (Motif 41)

A C T G A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A A G T C
p-value:1e-3
log p-value:-7.313e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 0.0bp
Average Position of motif in Background55.3 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GTTGGATTGA---
-TTTGATTGATGN
 A C T G A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GTTGGATTGA
--TTGATTGN
 A C T G A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C T G C G T A
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GTTGGATTGA-----
-----ATTGATTYND
 A C T G A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

Pitx1/MA0682.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTTGGATTGA
--GGGATTAA
 A C T G A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C T G C G T A
A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTTGGATTGA--
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C T G C G T A A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTTGGATTGA-
--GGGATTANN
 A C T G A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C T G C G T A A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTTGGATTGA-
TGTGGATTNNN
 A C T G A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C T G C G T A A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTTGGATTGA-
-ATGGGGTGAT
 A C T G A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C T G C G T A A C G T
A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

PB0144.1_Lef1_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTTGGATTGA-----
NNANTGATTGATNTTN
 A C G T A C T G A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTTGGATTGA-----
NNANTGATTGATNNNN
 A C G T A C T G A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C