Information for 13-GTCAAAGGAC (Motif 39)

A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C T G C G T A A G T C
p-value:1e-3
log p-value:-7.313e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets94.0 +/- 0.0bp
Average Position of motif in Background54.1 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2f6/MA0677.1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---GTCAAAGGAC-
GAGGTCAAAGGTCA
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

Rxra/MA0512.2/Jaspar

Match Rank:2
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GTCAAAGGAC-
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRB/MA0855.1/Jaspar

Match Rank:3
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GTCAAAGGAC-
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GTCAAAGGAC-
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GTCAAAGGAC-
GAGGTCAAAGGTCA
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:6
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GTCAAAGGAC---
AAAGGTCAAAGGTCAAC
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GTCAAAGGAC-
AGGGGTCAGAGGTCA
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----GTCAAAGGAC--
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----GTCAAAGGAC--
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GTCAAAGGAC--
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A