Information for 21-GTGCVGCDAGGHAATT (Motif 37)

C A T G G C A T C A T G G T A C T C A G A C T G G T A C C T A G G T C A A C T G C A T G G C A T C T G A T G C A C A G T A C G T
Reverse Opposite:
G T C A G T C A A C G T G A C T C G A T G A T C G T A C C A G T G A C T C A T G G T A C A G T C A C T G G T A C C G T A G T A C
p-value:1e-3
log p-value:-8.006e+00
Information Content per bp:1.618
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets20.0 +/- 0.0bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GTGCVGCDAGGHAATT--
-------AAGGCAAGTGT
 C A T G G C A T C A T G G T A C T C A G A C T G G T A C C T A G G T C A A C T G C A T G G C A T C T G A T G C A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GTGCVGCDAGGHAATT--
-------CAGGTAAGTAT
 C A T G G C A T C A T G G T A C T C A G A C T G G T A C C T A G G T C A A C T G C A T G G C A T C T G A T G C A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GTGCVGCDAGGHAATT
-----NACAGGAAAT-
 C A T G G C A T C A T G G T A C T C A G A C T G G T A C C T A G G T C A A C T G C A T G G C A T C T G A T G C A C A G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:4
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GTGCVGCDAGGHAATT---
----TTGAATGAAATTCGA
 C A T G G C A T C A T G G T A C T C A G A C T G G T A C C T A G G T C A A C T G C A T G G C A T C T G A T G C A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

PB0115.1_Ehf_2/Jaspar

Match Rank:5
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:GTGCVGCDAGGHAATT---
---AAGATCGGAANTNNNA
 C A T G G C A T C A T G G T A C T C A G A C T G G T A C C T A G G T C A A C T G C A T G G C A T C T G A T G C A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.48
Offset:9
Orientation:forward strand
Alignment:GTGCVGCDAGGHAATT---
---------GGAAATTCCC
 C A T G G C A T C A T G G T A C T C A G A C T G G T A C C T A G G T C A A C T G C A T G G C A T C T G A T G C A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

PH0061.1_Hoxb6/Jaspar

Match Rank:7
Score:0.47
Offset:7
Orientation:reverse strand
Alignment:GTGCVGCDAGGHAATT-------
-------NNNGTAATTACNNATA
 C A T G G C A T C A T G G T A C T C A G A C T G G T A C C T A G G T C A A C T G C A T G G C A T C T G A T G C A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

PH0024.1_Dlx5/Jaspar

Match Rank:8
Score:0.47
Offset:7
Orientation:forward strand
Alignment:GTGCVGCDAGGHAATT-------
-------GGGGTAATTAGCTCTG
 C A T G G C A T C A T G G T A C T C A G A C T G G T A C C T A G G T C A A C T G C A T G G C A T C T G A T G C A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T C G T C A G T C A G G A C T G T C A C G T A G A C T C A G T C T G A T A C G A G T C A C G T T G A C A C G T A T C G

PH0009.1_Bsx/Jaspar

Match Rank:9
Score:0.47
Offset:7
Orientation:forward strand
Alignment:GTGCVGCDAGGHAATT-------
-------CAGGTAATTACCTCAG
 C A T G G C A T C A T G G T A C T C A G A C T G G T A C C T A G G T C A A C T G C A T G G C A T C T G A T G C A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:10
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:GTGCVGCDAGGHAATT
----AGAAACGAAAGT
 C A T G G C A T C A T G G T A C T C A G A C T G G T A C C T A G G T C A A C T G C A T G G C A T C T G A T G C A C A G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T