Information for 20-CTAATAAAAAATG (Motif 30)

A G T C A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G
p-value:1e-3
log p-value:-8.006e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0057.1_Hoxb13/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CTAATAAAAAATG
AACCCAATAAAATTCG
 A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXD13/MA0909.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CTAATAAAAAATG
CCAATAAAAA---
 A G T C A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CTAATAAAAAATG
CCAATAAAAA---
 A G T C A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CTAATAAAAAATG
NCYAATAAAA----
 A C G T A G T C A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CTAATAAAAAATG
CCYMATAAAA----
 A C G T A G T C A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTAATAAAAAATG
CCAATAAAAC---
 A G T C A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CTAATAAAAAATG
CTACCAATAAAATTCT
 A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

HOXA10/MA0899.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTAATAAAAAATG
GGTAATAAAAA---
 A C G T A G T C A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CTAATAAAAAATG
AGCCGAAAAAAAAAT-
 A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:10
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CTAATAAAAAATG-
GTTCAAAAAAAAAATTC
 A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C