Information for 10-GGGCTCGCAA (Motif 25)

A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C A C T G C G T A A C T G A G T C A G T C A G T C
p-value:1e-3
log p-value:-8.006e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGGCTCGCAA
TBGCACGCAA
 A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A C G T A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGGCTCGCAA-
ATAAAGGCGCGCGAT
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A C G T A A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGGCTCGCAA-
ATAAGGGCGCGCGAT
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A C G T A A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGGCTCGCAA---
--GCTCGTAAAAA
 A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGGCTCGCAA
-GGCGCGCT-
 A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A C G T A
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGGCTCGCAA
-NGCTN----
 A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A C G T A
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGGCTCGCAA-----
AAACCTCGTAAAATTT
 A C G T A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGGCTCGCAA-
AGCCACTCAAG
 A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A C G T A A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGGCTCGCAA
GCTCGGSCTC----
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A C G T A
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGGCTCGCAA----
GGNTCTCGCGAGAAC
 A C G T A C T G A C T G A C T G A G T C A C G T A G T C A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C