Information for 8-CCCTATAATC (Motif 24)

A G T C A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T C G T A A C G T C G T A A C T G A C T G A C T G
p-value:1e-3
log p-value:-8.006e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 0.0bp
Average Position of motif in Background21.8 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX1/MA0711.1/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CCCTATAATC--
----TTAATCCG
 A G T C A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CCCTATAATC--
----YTAATCCY
 A G T C A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CCCTATAATC--
----TTAATCCT
 A G T C A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CCCTATAATC-------
---NNTAATCCNGNCNN
 A G T C A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

PB0128.1_Gcm1_2/Jaspar

Match Rank:5
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CCCTATAATC-
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

PH0126.1_Obox6/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCCTATAATC-------
--CNATAATCCGNTTNT
 A G T C A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CCCTATAATC--
----TTAATCCC
 A G T C A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCCTATAATC---
---CCTAATCCGC
 A G T C A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCCTATAATC---
---NYTAATCCYB
 A G T C A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCCTATAATC----
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C