Information for 5-YRRWRGAAYAKAT (Motif 12)

A G T C C T G A C T G A G C A T C T G A A C T G C G T A C G T A A G C T C G T A A C G T C G T A A C G T
Reverse Opposite:
G T C A A C G T G T C A A C G T C T G A C G A T A C G T A G T C A G C T C G A T A G C T A G C T C T A G
p-value:1e-6
log p-value:-1.442e+01
Information Content per bp:1.783
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif48.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets34.3 +/- 20.9bp
Average Position of motif in Background44.4 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:YRRWRGAAYAKAT-----
-ANNNGGATATATCCNNN
 A G T C C T G A C T G A G C A T C T G A A C T G C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:forward strand
Alignment:YRRWRGAAYAKAT---
------AACATATGTT
 A G T C C T G A C T G A G C A T C T G A A C T G C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

Atoh1/MA0461.2/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:forward strand
Alignment:YRRWRGAAYAKAT---
------AACATATGTT
 A G T C C T G A C T G A G C A T C T G A A C T G C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

BHLHE23/MA0817.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:YRRWRGAAYAKAT----
-----AAACATATGTTT
 A G T C C T G A C T G A G C A T C T G A A C T G C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

NEUROG2/MA0669.1/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:forward strand
Alignment:YRRWRGAAYAKAT---
------AACATATGTC
 A G T C C T G A C T G A G C A T C T G A A C T G C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C

OLIG3/MA0827.1/Jaspar

Match Rank:6
Score:0.59
Offset:6
Orientation:forward strand
Alignment:YRRWRGAAYAKAT---
------ACCATATGTT
 A G T C C T G A C T G A G C A T C T G A A C T G C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:YRRWRGAAYAKAT
---TGGAACAGMA
 A G T C C T G A C T G A G C A T C T G A A C T G C G T A C G T A A G C T C G T A A C G T C G T A A C G T
A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:YRRWRGAAYAKAT
-CCAGGAACAG--
 A G T C C T G A C T G A G C A T C T G A A C T G C G T A C G T A A G C T C G T A A C G T C G T A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

OLIG2/MA0678.1/Jaspar

Match Rank:9
Score:0.58
Offset:6
Orientation:forward strand
Alignment:YRRWRGAAYAKAT---
------ACCATATGGT
 A G T C C T G A C T G A G C A T C T G A A C T G C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:YRRWRGAAYAKAT---
------AACAGATGGT
 A G T C C T G A C T G A G C A T C T G A A C T G C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T