Information for 8-AGAAGCTTCTTGT (Motif 19)

C G T A A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C G T
Reverse Opposite:
G T C A G T A C C G T A C G T A A C T G C G T A C G T A A C T G A G T C C G A T A C G T G T A C A C G T
p-value:1e-7
log p-value:-1.618e+01
Information Content per bp:1.913
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets84.0 +/- 7.9bp
Average Position of motif in Background31.7 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGAAGCTTCTTGT
-CAAGCTT-----
 C G T A A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C G T
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AGAAGCTTCTTGT---
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGAAGCTTCTTGT-
TAGAANVTTCTAGAA
 A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGAAGCTTCTTGT
----GCTTCC---
 C G T A A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AGAAGCTTCTTGT
ADGGYAGYAGCATCT---
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGAAGCTTCTTGT-
----ACTTCCTGTT
 C G T A A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGAAGCTTCTTGT
CAGCTGTTTCCT--
 A C G T C G T A A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C G T
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T

HSF4/MA0771.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGAAGCTTCTTGT-
-GAANNTTCTAGAA
 C G T A A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T
A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGAAGCTTCTTGT---
ACATGCTACCTAATAC
 C G T A A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGAAGCTTCTTGT
---CACTTCCTGT
 C G T A A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T