Information for 7-GCCMAGCSTWGCY (Motif 13)

A C T G A G T C A T G C G T A C C G T A A C T G A G T C A T C G A C G T C G T A A C T G A G T C A G C T
Reverse Opposite:
C T G A A C T G A G T C C G A T C G T A A T G C A C T G A G T C A C G T C A T G A T C G A C T G G T A C
p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.2 +/- 27.0bp
Average Position of motif in Background42.8 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCMAGCSTWGCY
TGCCCAGNHW----
 A C G T A C T G A G T C A T G C G T A C C G T A A C T G A G T C A T C G A C G T C G T A A C T G A G T C A G C T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCCMAGCSTWGCY--
TCCCAGMCRAGCCCC
 A C T G A G T C A T G C G T A C C G T A A C T G A G T C A T C G A C G T C G T A A C T G A G T C A G C T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCCMAGCSTWGCY
CGTGCCAAG-------
 A C G T A C G T A C G T A C T G A G T C A T G C G T A C C G T A A C T G A G T C A T C G A C G T C G T A A C T G A G T C A G C T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCCMAGCSTWGCY
GCAGCCAAGCGTGACN
 A C G T A C G T A C G T A C T G A G T C A T G C G T A C C G T A A C T G A G T C A T C G A C G T C G T A A C T G A G T C A G C T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCCMAGCSTWGCY
---CAGCC-----
 A C T G A G T C A T G C G T A C C G T A A C T G A G T C A T C G A C G T C G T A A C T G A G T C A G C T
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCCMAGCSTWGCY
NNGGCCACGCCTTTN-
 A C G T A C G T A C G T A C T G A G T C A T G C G T A C C G T A A C T G A G T C A T C G A C G T C G T A A C T G A G T C A G C T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCCMAGCSTWGCY
TGCCAA--------
 A C G T A C T G A G T C A T G C G T A C C G T A A C T G A G T C A T C G A C G T C G T A A C T G A G T C A G C T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:8
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------GCCMAGCSTWGCY
GAGGGCAGCCAAGCGTGAC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C G T A C C G T A A C T G A G T C A T C G A C G T C G T A A C T G A G T C A G C T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCCMAGCSTWGCY
--CAAGCTT----
 A C T G A G T C A T G C G T A C C G T A A C T G A G T C A T C G A C G T C G T A A C T G A G T C A G C T
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCCMAGCSTWGCY--
GTCATGCHTGRCTGS
 A C T G A G T C A T G C G T A C C G T A A C T G A G T C A T C G A C G T C G T A A C T G A G T C A G C T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C