p-value: | 1e-3 |
log p-value: | -8.917e+00 |
Information Content per bp: | 1.878 |
Number of Target Sequences with motif | 2.0 |
Percentage of Target Sequences with motif | 0.25% |
Number of Background Sequences with motif | 1.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 32.0 +/- 22.4bp |
Average Position of motif in Background | 11.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 2.50 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0120.1_Foxj1_2/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | YGRGTTWGTTRTG---- --GTNTTGTTGTGANNT |
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PB0121.1_Foxj3_2/Jaspar
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | YGRGTTWGTTRTG----- -NNCTTTGTTTTGNTNNN |
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PB0123.1_Foxl1_2/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | YGRGTTWGTTRTG---- -NNTTTTGTTTTGATNT |
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PB0119.1_Foxa2_2/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | YGRGTTWGTTRTG--- -NCNTTTGTTATTTNN |
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PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | YGRGTTWGTTRTG-- NNAATTAGTCACGGT |
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PB0122.1_Foxk1_2/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | YGRGTTWGTTRTG----- ---NNNTGTTGTTGTTNG |
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PB0176.1_Sox5_2/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | YGRGTTWGTTRTG--- -NNCTNAATTATGANN |
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HMBOX1/MA0895.1/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | YGRGTTWGTTRTG ---ACTAGTTAAC |
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POL007.1_BREd/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | YGRGTTWGTTRTG ---GTTTGTT--- |
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MF0011.1_HMG_class/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | YGRGTTWGTTRTG ----ATTGTT--- |
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