Information for 5-CTCATAAAAYATG (Motif 10)

T G A C A C G T A G T C G T C A C A G T C T G A G T C A C T G A G C T A A G T C C G T A C G A T A T C G
Reverse Opposite:
A T G C C G T A C G A T C T A G C A G T A G C T A C G T G A C T G C T A A C G T T A C G T C G A A C T G
p-value:1e-8
log p-value:-1.988e+01
Information Content per bp:1.673
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.2 +/- 24.9bp
Average Position of motif in Background43.3 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CTCATAAAAYATG
NCYAATAAAA----
 A C G T T G A C A C G T A G T C G T C A C A G T C T G A G T C A C T G A G C T A A G T C C G T A C G A T A T C G
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:2
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----CTCATAAAAYATG
AAAGCTCGTAAAATTT-
 A C G T A C G T A C G T A C G T T G A C A C G T A G T C G T C A C A G T C T G A G T C A C T G A G C T A A G T C C G T A C G A T A T C G
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CTCATAAAAYATG
GTCGTAAAAT---
 T G A C A C G T A G T C G T C A C A G T C T G A G T C A C T G A G C T A A G T C C G T A C G A T A T C G
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CTCATAAAAYATG
CCYMATAAAA----
 A C G T T G A C A C G T A G T C G T C A C A G T C T G A G T C A C T G A G C T A A G T C C G T A C G A T A T C G
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CTCATAAAAYATG
GTCATAAAAN---
 T G A C A C G T A G T C G T C A C A G T C T G A G T C A C T G A G C T A A G T C C G T A C G A T A T C G
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CTCATAAAAYATG
CCAATAAAAA---
 T G A C A C G T A G T C G T C A C A G T C T G A G T C A C T G A G C T A A G T C C G T A C G A T A T C G
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:7
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CTCATAAAAYATG
NGYCATAAAWCH--
 A C G T T G A C A C G T A G T C G T C A C A G T C T G A G T C A C T G A G C T A A G T C C G T A C G A T A T C G
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:8
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CTCATAAAAYATG
GCTCGTAAAAA---
 A C G T T G A C A C G T A G T C G T C A C A G T C T G A G T C A C T G A G C T A A G T C C G T A C G A T A T C G
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:9
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----CTCATAAAAYATG
AAACCTCGTAAAATTT-
 A C G T A C G T A C G T A C G T T G A C A C G T A G T C G T C A C A G T C T G A G T C A C T G A G C T A A G T C C G T A C G A T A T C G
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:10
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CTCATAAAAYATG
GCAATAAAA----
 T G A C A C G T A G T C G T C A C A G T C T G A G T C A C T G A G C T A A G T C C G T A C G A T A T C G
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T