Information for 13-SSSGSTCCCAWCC (Motif 20)

A T C G A T G C A T C G A C T G A T C G A C G T A G T C A G T C A G T C C G T A G C T A A G T C A G T C
Reverse Opposite:
A C T G A C T G C G A T A C G T A C T G A C T G A C T G C G T A T A G C A G T C A T G C A T C G A T G C
p-value:1e-8
log p-value:-1.952e+01
Information Content per bp:1.850
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.4 +/- 23.9bp
Average Position of motif in Background51.9 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:SSSGSTCCCAWCC
---GGTCCCGCCC
 A T C G A T G C A T C G A C T G A T C G A C G T A G T C A G T C A G T C C G T A G C T A A G T C A G T C
A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:SSSGSTCCCAWCC----
-ACTATGCCAACCTACC
 A T C G A T G C A T C G A C T G A T C G A C G T A G T C A G T C A G T C C G T A G C T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:SSSGSTCCCAWCC
----ATGCCAACC
 A T C G A T G C A T C G A C T G A T C G A C G T A G T C A G T C A G T C C G T A G C T A A G T C A G T C
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:SSSGSTCCCAWCC
---GCTCCG----
 A T C G A T G C A T C G A C T G A T C G A C G T A G T C A G T C A G T C C G T A G C T A A G T C A G T C
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:SSSGSTCCCAWCC
GTGGGCCCCA---
 A T C G A T G C A T C G A C T G A T C G A C G T A G T C A G T C A G T C C G T A G C T A A G T C A G T C
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:SSSGSTCCCAWCC-------
-----TCCCAGMCRAGCCCC
 A T C G A T G C A T C G A C T G A T C G A C G T A G T C A G T C A G T C C G T A G C T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

PB0167.1_Sox13_2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:SSSGSTCCCAWCC-----
-ANNTNCCCACCCANNAC
 A T C G A T G C A T C G A C T G A T C G A C G T A G T C A G T C A G T C C G T A G C T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:SSSGSTCCCAWCC----
-NNAGTCCCACTCNNNN
 A T C G A T G C A T C G A C T G A T C G A C G T A G T C A G T C A G T C C G T A G C T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:SSSGSTCCCAWCC-
----GCCCCGCCCC
 A T C G A T G C A T C G A C T G A T C G A C G T A G T C A G T C A G T C C G T A G C T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

PB0107.1_Ascl2_2/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:SSSGSTCCCAWCC-----
--CTATCCCCGCCCTATT
 A T C G A T G C A T C G A C T G A T C G A C G T A G T C A G T C A G T C C G T A G C T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T